KEGG   Saccharomyces cerevisiae (budding yeast): YGR063C
Entry
YGR063C           CDS       T00005                                 
Symbol
SPT4
Name
(RefSeq) transcription elongation factor SPT4
  KO
K15171  transcription elongation factor SPT4
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    YGR063C (SPT4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sce03021]
    YGR063C (SPT4)
   03019 Messenger RNA biogenesis [BR:sce03019]
    YGR063C (SPT4)
Transcription machinery [BR:sce03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     YGR063C (SPT4)
  RNA polymerase I system
     YGR063C (SPT4)
Messenger RNA biogenesis [BR:sce03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     YGR063C (SPT4)
SSDB
Motif
Pfam: Spt4
Other DBs
NCBI-GeneID: 852955
NCBI-ProteinID: NP_011577
SGD: S000003295
UniProt: P32914
Structure
Position
VII:complement(617516..617824)
AA seq 102 aa
MSSERACMLCGIVQTTNEFNRDGCPNCQGIFEEAGVSTMECTSPSFEGLVGMCKPTKSWV
AKWLSVDHSIAGMYAIKVDGRLPAEVVELLPHYKPRDGSQVE
NT seq 309 nt   +upstreamnt  +downstreamnt
atgtctagtgaaagagcctgtatgctgtgtggcatagtgcagaccacaaatgagtttaat
agagatggttgtcccaactgtcagggtatttttgaagaggcaggtgtttctacaatggaa
tgtacgtcgccttctttcgagggcctcgtaggaatgtgtaagcctactaagtcgtgggta
gcaaagtggctgagcgtagatcatagtatagctggtatgtacgccatcaaggtcgatggt
agactaccagctgaggttgtggagctgttgcctcactacaaaccgagggatggcagtcaa
gttgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (1)   
   Pfam (1)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system