KEGG   Saccharomyces cerevisiae (budding yeast): YHR197W
Entry
YHR197W           CDS       T00005                                 
Symbol
RIX1, IPI2
Name
(RefSeq) Rix1p
  KO
K14828  pre-rRNA-processing protein RIX1
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:sce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sce03009]
    YHR197W (RIX1)
Ribosome biogenesis [BR:sce03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    YHR197W (RIX1)
SSDB
Motif
Pfam: RIX1
Other DBs
NCBI-GeneID: 856604
NCBI-ProteinID: NP_012067
SGD: S000001240
UniProt: P38883
Structure
Position
VIII:493896..496187
AA seq 763 aa
MSEEFIAVSTLARNLEIAKGNEFHTILATLRSPVYINEQLLKSELSFLVTKILKLIRSGN
DFDLWKGCHTSVVTCAYNPLVLSTHGGQLLAAIYSRLEQKTGFYSSVISSSHGKQLFNTL
ISSVAIIIDLMKNKPTLSREALVPKLKAIIPTLITLSQYEPELVLPVLQRILKRNTTTFK
PFTNKFRTVLINLIISDYASLGTKTQRLVCENFAYLHLLKIQVSDTSDDETQAHHKIYAD
SNWRTGLMSILSQFKPIIQLCGEILDFEQDNELYKLIKSLPVIDESNNKEEFLPSLKLDF
NAPLTLWEIPQRLSLLADMLVAFISLPTPFPIRVPLGGINSLCEVLLGVSNKYLPLKKEL
RHDNELNGVINTILPQIQFQGIRLWEIMVSKYGKCGLSFFEGILSSIELFIPLKKKSNNE
IDFNVVGSLKFEFATVFRLVNMILSHLGHQLNIISVISQLIEVALFLSHDKTLIDSLFKN
RKSIMKQQTKTKQSKRSKSAEGAFSDIYTHPELFVCKNSMNWFNEINDFFITALNNWILP
STPHIQILKYSITQSLRLKERFGYIPESFVNLLRCEVLHPGSERVSILPIAISLLKNIND
DMFELLCHPKVPVGMVYQLHKPLDLGEDGEVRDDINKKEVETNESSSNANTGLETLKALE
NLENVTIPEPKHEVPKVVDDTAIFKKRSVEEVIERESTSSHKKVKFVEETTVDNGEELIV
KKAVSQTKEEEKPMEDSEDEEQEEFEIPAIELSDDEEEEEEEE
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgtcagaggaatttatcgcagtttctactttggctagaaacctggaaattgccaagggt
aatgagtttcataccattttggcgactttaagatcaccagtttatatcaatgaacagctg
ctaaaatccgaattgagcttccttgttacaaaaatcctaaaacttatcagatcaggcaat
gactttgatctttggaaaggatgtcacacctctgttgtgacttgcgcctataatccactg
gtcttatcgactcatggaggtcaattgcttgctgccatttattccagattggaacagaag
acgggtttctattcttcggttatttcttcatcacatggaaagcagctattcaataccctt
atttcttctgtagcgattatcattgatttaatgaagaataaacctacgttatcgagagaa
gcactggttcccaaattaaaggctatcattccaacgttaattacattgtctcaatacgag
cccgaacttgttctaccagtactacagaggatattgaagagaaacactacaacatttaag
ccatttaccaacaaattccgcactgtgttaatcaatttaatcatatcagactatgcttct
ttaggcactaagacgcagaggcttgtttgcgaaaactttgcttatttgcatttgctgaaa
attcaggttagtgatactagcgatgacgaaactcaagcacatcacaaaatatatgctgat
tctaattggagaacaggattaatgtccatcttatcacaattcaagcccataattcaatta
tgtggagaaatcttggattttgaacaagataatgagctgtataaactaattaaaagttta
ccggttatcgatgaatccaataacaaagaagaatttttaccctcattgaaattagacttc
aacgcacctttaactttatgggaaattccacaacgtttgtccttattggctgacatgctt
gttgctttcatctctttaccaactccctttcccattcgagttccgctgggtggtattaat
tccctttgtgaagttttgttgggagttagtaacaaatatttaccgttaaaaaaagaattg
cgtcatgataatgaactaaatggggtcatcaataccatcttacctcaaatacaatttcaa
ggcattaggttatgggaaattatggtttcaaaatatggcaaatgcggtttatcatttttc
gaaggaatcctttcttccattgaacttttcattccattaaaaaagaaaagtaacaatgaa
attgattttaatgttgttgggtctttaaaatttgagtttgctactgttttcagattggta
aatatgattttgtctcatttaggccaccaactgaacataatcagcgtcatatcccaatta
atcgaagtggcgttgttcttatctcatgataaaacattgattgattctttattcaaaaat
cgtaaaagcatcatgaaacaacagactaaaacaaaacaatcaaagaggagtaaaagtgcc
gaaggtgcattttctgatatttatacgcacccagagctatttgtgtgtaaaaattccatg
aattggttcaatgaaatcaatgatttttttattactgcactaaataattggattttgcct
tcaactccacatattcaaattttgaaatatagtatcacgcaatctttaagattaaaggaa
agatttggttatattccagaaagctttgttaatctcctgcgttgcgaggttcttcaccca
ggtagtgaacgtgtttcaattttaccgattgcaatatcactattaaagaatatcaatgat
gatatgtttgaattactgtgtcatccaaaagtgccagtcggtatggtgtaccagttgcac
aaacctttggacttaggcgaagacggggaagtaagggatgatatcaacaagaaggaggtt
gaaacgaacgaatcatcctcaaacgccaatactggcctggagactttaaaagcgttagaa
aatttggaaaatgttacaatccctgaacccaaacacgaagtcccaaaggtcgtcgatgat
actgccatattcaagaaaaggtcagtagaagaagtcattgaaagagagtctacatcttca
cataagaaagtgaaattcgttgaagaaacaaccgtggataatggcgaagaattgattgta
aaaaaagctgtaagccaaactaaggaagaagagaagccaatggaggacagtgaagatgaa
gaacaggaggagtttgaaattcccgctatcgaattaagtgatgacgaagaggaggaggaa
gaagaagaataa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (1)   
   Pfam (1)   
All databases (38)   

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