KEGG   Saccharomyces cerevisiae (budding yeast): YKL057C
Entry
YKL057C           CDS       T00005                                 
Symbol
NUP120, RAT2
Name
(RefSeq) Nup120p
  KO
K14303  nuclear pore complex protein Nup160
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    YKL057C (NUP120)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sce03019]
    YKL057C (NUP120)
   03036 Chromosome and associated proteins [BR:sce03036]
    YKL057C (NUP120)
Messenger RNA biogenesis [BR:sce03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     YKL057C (NUP120)
Chromosome and associated proteins [BR:sce03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    YKL057C (NUP120)
SSDB
Motif
Pfam: Nup54
Other DBs
NCBI-GeneID: 853808
NCBI-ProteinID: NP_012866
SGD: S000001540
UniProt: P35729
Structure
Position
XI:complement(330856..333969)
AA seq 1037 aa
MACLSRIDANLLQYYEKPEPNNTVDLYVSNNSNNNGLKEGDKSISTPVPQPYGSEYSNCL
LLSNSEYICYHFSSRSTLLTFYPLSDAYHGKTINIHLPNASMNQRYTLTIQEVEQQLLVN
VILKDGSFLTLQLPLSFLFSSANTLNGEWFHLQNPYDFTVRVPHFLFYVSPQFSVVFLED
GGLLGLKKVDGVHYEPLLFNDNSYLKSLTRFFSRSSKSDYDSVISCKLFHERYLIVLTQN
CHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYNNTLVTLLPLENGLFQM
GTLLVDSSGILTYTFQNNIPTNLSASAIWSIVDLVLTRPLELNVEASYLNLIVLWKSGTA
SKLQILNVNDESFKNYEWIESVNKSLVDLQSEHDLDIVTKTGDVERGFCNLKSRYGTQIF
ERAQQILSENKIIMAHNEDEEYLANLETILRDVKTAFNEASSITLYGDEIILVNCFQPYN
HSLYKLNTTVENWFYNMHSETDGSELFKYLRTLNGFASTLSNDVLRSISKKFLDIITGEL
PDSMTTVEKFTDIFKNCLENQFEITNLKILFDELNSFDIPVVLNDLINNQMKPGIFWKKD
FISAIKFDGFTSIISLESLHQLLSIHYRITLQVLLTFVLFDLDTEIFGQHISTLLDLHYK
QFLLLNLYRQDKCLLAEVLLKDSSEFSFGVKFFNYGQLIAYIDSLNSNVYNASITENSFF
MTFFRSYIIENTSHKNIRFFLENVECPFYLRHNEVQEFMFAMTLFSCGNFDQSYEIFQLH
DYPEAINDKLPTFLEDLKSENYHGDSIWKDLLCTFTVPYRHSAFYYQLSLLFDRNNSQEF
ALKCISKSAEYSLKEIQIEELQDFKEKQHIHYLNLLIHFRMFEEVLDVLRLGHECLSDTV
RTNFLQLLLQEDIYSRDFFSTLLRLCNAHSDNGELYLRTVDIKIVDSILSQNLRSGDWEC
FKKLYCFRMLNKSERAAAEVLYQYILMQADLDVIRKRKCYLMVINVLSSFDSAYDQWILN
GSKVVTLTDLRDELRGL
NT seq 3114 nt   +upstreamnt  +downstreamnt
atggcatgcctctcaagaattgatgcaaatttgctccaatattatgaaaaacctgaaccc
aataatacggttgatttatacgtcagtaataacagtaataataacgggctgaaagaagga
gataagtccatctctacaccagttcctcagccttacggaagtgaatattccaattgtttg
ttattgagtaactctgagtatatctgttaccatttttcctcaagatcaacattgttgaca
ttttatcctttgagtgacgcataccatgggaagacaattaatatacacttaccaaatgct
tctatgaatcagagatacactttaacgatacaagaagtggaacagcaattactggttaat
gttatcttaaaagatggttcgtttttaacgttacaactacccctaagtttcctattttca
tcggccaacactctcaatggagagtggtttcatctccaaaatccctacgactttacagtt
agagttcctcatttccttttctatgtatcaccccagttctcagttgtttttttggaagat
ggcggtttgttgggtttaaaaaaagttgacggcgtacattacgagcctttactattcaat
gataattcatacttgaaaagcctaacgcgatttttttctaggagttctaaatcggattac
gatagtgtgattagttgtaaattattccatgaaagatacttaattgtgttgactcagaat
tgccacttgaaaatttgggatttaacttcatttactttaatacaagattatgatatggtt
tcacagtcagattcagacccaagccattttagaaaagtggaagctgtaggggaatacctt
tccttgtataacaatactctagttacattgttgcctttggaaaatgggctttttcaaatg
ggcaccttgttggttgattcaagcggtattttgacttatacttttcaaaataacatcccc
actaatctttcagcttctgctatttggtcaattgtagatttagttctaacgagaccattg
gagttgaatgtcgaggctagttatttaaatttgatcgttttatggaaaagtggcactgct
agcaagttacagatactaaacgtaaatgatgaaagtttcaaaaactatgaatggatagaa
tcagttaacaaatccttagtagatttgcaatccgaacatgatttggatatcgttacaaag
actggagatgttgagaggggtttctgtaatttgaaatcaagatatggtacccaaattttt
gaacgtgcacagcaaatattgagtgaaaataagattattatggctcataacgaagatgaa
gaatatttggctaatttagaaacaatattgagagacgtaaaaaccgcattcaacgaggct
tcttctataacactttatggcgatgaaattattctcgtcaattgtttccaaccgtataat
cattccctttacaagctgaatactactgtggagaattggttttataatatgcactctgaa
actgatggttctgaattgttcaagtatttaaggacattgaatggttttgcttctactttg
tcaaatgatgttcttagatccatttctaagaagtttcttgatataataacaggagagctg
cctgattctatgactaccgtagaaaaatttacggacattttcaaaaattgcctagaaaat
caatttgaaatcacaaatctaaagattcttttcgacgaattaaactcttttgatataccc
gttgttttaaatgatttaatcaataaccaaatgaagcctggtatattttggaaaaaggat
ttcatctctgcaatcaaattcgatggtttcacaagtataatttccctagaatctcttcac
cagttactttccatacattatcgtattactttacaagtattgttaacattcgttctgttc
gatcttgataccgaaattttcggacagcatatatctacattattggatttgcattataag
caatttttattgttaaacctttatagacaagataagtgtctgttggcggaagttcttctc
aaggattcttctgaattctctttcggtgtcaaattttttaactacggccaactcattgcc
tatatcgattccttaaactctaatgtttacaatgcttccatcactgaaaattctttcttt
atgacgtttttccgctcatatatcattgaaaacacatctcataagaatataaggttcttt
ctcgagaacgttgaatgccccttctacttacgccacaacgaggtgcaagaatttatgttt
gccatgacgttatttagttgtggtaatttcgatcaatcctatgaaatttttcaactacac
gattatccggaggctatcaatgataaattgccgacattcttagaagaccttaagagtgaa
aactatcacggtgatagtatatggaaagatcttttgtgcacctttacagttccatatagg
cattctgcattctattatcaattatctctcttatttgatagaaataacagccaagaattt
gctttgaaatgtatatctaagtcagcagaatattcattaaaagaaattcagattgaagaa
ctgcaagacttcaaagaaaaacagcatattcattatttaaatcttttaatccacttcaga
atgtttgaagaagtcttggatgttttgagattgggtcacgagtgtctttccgacacagta
agaacaaattttctccaattattattacaggaagacatatattcacgagattttttcagc
acacttctgcgcttgtgtaacgcacattcagacaatggcgagctatatcttcgtacagta
gatattaaaatagtggatagtattctgtcacaaaatctacggagtggtgattgggagtgt
tttaagaaactttattgttttagaatgttgaacaaaagcgagagggctgctgcagaagta
ctgtaccagtacatattaatgcaagctgatcttgatgttattcgaaagagaaaatgttac
ctaatggtcatcaacgttttatctagctttgatagtgcatacgatcaatggattctaaac
ggaagtaaagtggttactttaactgatttaagagatgagttacgaggtctatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (9)   
   PDB (9)   
Protein domain (1)   
   Pfam (1)   
All databases (63)   

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