KEGG   Saccharomyces cerevisiae (budding yeast): YLR135W
Entry
YLR135W           CDS       T00005                                 
Symbol
SLX4
Name
(RefSeq) Slx4p
  KO
K15079  structure-specific endonuclease subunit SLX4
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    YLR135W (SLX4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sce03400]
    YLR135W (SLX4)
DNA repair and recombination proteins [BR:sce03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     YLR135W (SLX4)
SSDB
Motif
Pfam: Slx4 Adeno_100 Tfb2 MRP PTPA SPEF2_C
Other DBs
NCBI-GeneID: 850826
NCBI-ProteinID: NP_013236
SGD: S000004125
UniProt: Q12098
Structure
Position
XII:413281..415527
AA seq 748 aa
MELQRAQRNLKFLQNEDYVNVTDQTNLNGESQNAYSLGMETQVPEMQFSLSSDDDSIGTQ
VKSVTAQKSPMTQETTKNDTERNKDVDKSCNPVSTSHPDLGGSNIEENIFINTQIQSRLD
DAEEETNLKLKLEKFKYSFKSSNADDTHSNANVTAKRRPAIRKANSKLKTKPKTKRDPKI
IKNITDFNINNYERSRTASLLKQLSGKHKKVLDIIKTQNEGNSDKPPRARNNKGEKATFD
TYSEQEWKDIMKLLLQKFPQSEETDLNEVQKFLYGSEKSSNSLDNQESSQQRLWTASQLP
PELPDEAIQPEQEERIRDTQSAVNFLSLSQVMDDKSEIMKDEESIIISRGDSTSSQEYGN
GLEPQQPVGNVVGEDIELAVGTRINAFSLTDYKACKPMSVEVSRRCENSTDNDYDNISIV
SDTTDETSTLFPLDQYRYVFIENDERPPLATDTIGSTQFFTPNTSPLDGIIDLTQESFKA
VRSLISPLKVENNKTGVTSQASNQVQVPATRTPTIIPQKNLTTTLKTEEEKNNIGSSIRV
KLLQESVVKLNPKLVKHNFYRVEANDSEEEETEFDDQFCIADIQLVDSSKISTKDSTQNP
TTSNDIIDTSAASSIASPEKFCEIMMSQSMKELRQSLKTVGLKPMRTKVEIIQSLQTASQ
ILSTANPDNKGEHGGVANFSKIEIFDHLTELIEAFPDFLERIYTFEPIPLNELIEKLFSA
EPFVSQIDEMTIREWADVQGICLRNDKK
NT seq 2247 nt   +upstreamnt  +downstreamnt
atggaacttcagagggcacaacggaatttgaagtttttacaaaacgaggattatgtgaac
gttaccgatcaaactaacctgaatggagagagccagaatgcttactctttaggaatggaa
actcaagtaccggaaatgcagttttccttatcatctgatgatgattcaataggtacgcaa
gtaaaaagcgtaactgcacaaaaatcgcctatgacgcaagagactacgaaaaacgataca
gaaagaaataaagatgttgataaaagttgtaacccagtcagcacttcccatcccgattta
ggcggatcaaatatcgaggagaacatattcattaacactcaaattcaaagccgacttgat
gacgcagaggaagaaacaaatcttaagttaaaacttgaaaaattcaagtattcgttcaag
agtagtaacgcagatgatacccacagcaatgcaaatgtaacagctaaaagaagaccagca
ataaggaaggctaattcgaaactcaaaacaaaacctaaaactaaacgagaccctaaaatt
atcaaaaatataactgatttcaatattaataactacgaacgttcaaggactgccagctta
ttaaagcaattatcaggtaagcacaagaaggttttggacataataaagacgcaaaatgaa
ggaaacagtgataaacctcccagagcaaggaataacaagggtgaaaaagctacttttgat
acatatagtgaacaggagtggaaagatattatgaaacttcttctacaaaagtttccgcaa
agtgaggaaacggatttgaatgaagtccagaaatttttatatggaagcgaaaaaagctcg
aattctctagacaatcaagaatcctcacaacaaagactttggacagcatcacaattacca
cccgagcttcccgatgaggctattcaaccagagcaggaagaaaggatacgcgatacccaa
agtgcagtaaatttcttatcgttgtctcaagtaatggatgacaaaagtgaaattatgaaa
gacgaagaaagcataattatttcacggggagattctacaagctctcaagaatatggaaac
gggttagagccacaacaaccggtaggaaatgttgttggtgaagatattgaactggctgtg
ggaacacgtataaatgcattttcactgacagattataaagcttgcaaacctatgtctgtt
gaggtaagtagaagatgcgaaaacagtacggataatgattatgacaatatttctattgtc
tcagatactacagatgagacatccacattgtttccactagaccagtatcggtatgttttc
attgaaaatgatgaaagaccaccattagccaccgacacgataggcagcacacagtttttc
actccaaacacatcgcctttggatgggataatcgatttaacacaggaatcattcaaagct
gttcgatcgttaatatcacctttgaaagtagaaaacaacaaaacaggggtaacatcacaa
gcatcaaatcaggttcaggtaccagctacaagaacccctacaattattcctcaaaagaac
cttactacaactttaaaaactgaagaagaaaagaataacataggaagttccatcagagtt
aaattattgcaagaaagcgtagttaagctaaaccccaaactggtgaaacataacttttat
agagttgaggcaaatgattctgaagaagaggagacagaatttgatgaccaattctgcatt
gctgatatccaattggtagattcctccaaaatttcgactaaagattctacacaaaatcct
actactagcaacgacattattgatacctctgcagctagttccatagcttctcccgagaaa
ttttgtgagatcatgatgtcccaatcaatgaaagagcttcgacaaagcttgaaaacagtg
gggttgaaacctatgaggacgaaggttgaaatcattcaatccttacaaactgcatctcaa
attctgtccacagctaatccagataataaaggtgagcatggtggggtggcaaatttcagt
aagatagaaatatttgatcatttaaccgaactaattgaagccttccctgattttttggag
cgaatatatacctttgaacccattccgctaaatgagctaattgaaaagctgttcagcgcc
gagccatttgtttcgcaaatcgacgaaatgaccatcagagaatgggccgatgttcaagga
atatgtctgagaaacgataaaaagtag

  All links  
Gene (17)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (4)   
   PDB (4)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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