KEGG   Saccharomyces cerevisiae (budding yeast): YML045W
Entry
YML045W           CDS       T00005                                 
Name
(RefSeq) gag-pol fusion protein
Organism
sce  Saccharomyces cerevisiae (budding yeast)
SSDB
Motif
Pfam: TYA RVT_2 rve Pol_BBD gag_pre-integrs Retrotran_gag_2 RVT_1
Other DBs
NCBI-GeneID: 854963
NCBI-ProteinID: NP_013668
SGD: S000004508
UniProt: Q04711
Position
XIII:join(184461..185765,185767..189729)
AA seq 1755 aa
MESQQLSNYPNISHGSACASVTSKEVHTNQDPLDVSASKIQEYDKASTKANSQQTTTPAS
SAVPENLHHASPQPASVPPPQNGPYPQQCMMTQNQANPSGWSFYGHPSMIPYTPYQMSPM
YFPPGPQSQFPQYPSSVGTPLSTPSPESGNTFTDSSSADSDMTSTKKYVRPPPMLTSPND
FPNWVKTYIKFLQNSNLGGIIPTVNGKPVRQITDDELTFLYNTFQIFAPSQFLPTWVKDI
LSVDYTDIMKILSKSIEKMQSDTQEANDIVTLANLQYNGSTPADAFETKVTNIIDRLNNN
GIHINNKVACQLIMRGLSGEYKFLRYTRHRHLNMTVAELFLDIHAIYEEQQGSRNSKPNY
RRNPSDEKNDSRSYTNTTKPKVIARNPQKTNNSKSKTARAHNVSTSNNSPSTDNDSISKS
TTEPIQLNNKHDLHLGQKLTESTVNHTNHSDDELPGHLLLDSGASRTLIRSAHHIHSASS
NPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHTPNIAYDLLSLNELAAVDITAC
FTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNISVPTINNVHTSESTRKYPYPFIHR
MLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQN
SYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILA
FIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLD
DCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFGQPV
IVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRLDQFN
YDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQSDIELHPEQPRNVLSKAVS
PTDSTPPSTHTEDSKRVSKTNIRAPREVDPNISESNILPSKKRSSTPQISNIESTGSGGM
HKLNVPLLAPMSQSNTHESSHASKSKDFRHSDSYSENETNHTNVPISSTGGTNNKTVPQI
SDQETEKRIIHRSPSIDASPPENNSSHNIVPIKTPTTVSEQNTEESIIADLPLPDLPPES
PTEFPDPFKELPPINSHQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWNTKN
MRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKEVNQ
LLKMNTWDTDKYYDRKEIDPKRVINSMFIFNRKRDGTHKARFVARGDIQHPDTYDSGMQS
NTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLIRLKKS
LYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQVTICLFVDDMILFSKDLNANK
KIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPL
NPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINT
LAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVAISDASYGNQPYYK
SQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLSHLVQELNKKPITK
GLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKP
LPIKTFKLLTNKWIH
NT seq 5268 nt   +upstreamnt  +downstreamnt
atggaatcccaacaattatctaattacccaaatatatctcatggtagcgcctgtgcttcg
gttacttctaaggaagtccacacaaatcaagatccgttagacgtttcagcttccaaaatt
caagaatatgataaggcttccactaaggctaactctcaacagacaacaacacctgcttca
tcagctgttccagagaacctccatcatgcctctcctcaacctgcttcagtaccacctcca
cagaatgggccgtacccacagcagtgcatgatgacccaaaaccaagccaatccatctggt
tggtcattttacggacacccatctatgattccgtatacaccttatcaaatgtcgcctatg
tactttccacctgggccacaatcacagtttccgcagtatccatcatcagttggaacgcct
ctgagcactccatcacctgagtcaggtaatacatttactgattcatcctcagcggactct
gatatgacatccactaaaaaatatgtcagaccaccaccaatgttaacctcacctaatgac
tttccaaattgggttaaaacatacatcaaatttttacaaaactcgaatctcggtggtatt
attccgacagtaaacggaaaacccgtacgtcagatcactgatgatgaactcaccttcttg
tataacacttttcaaatatttgctccctctcaattcctacctacctgggtcaaagacatc
ctatccgttgattatacggatatcatgaaaattctttccaaaagtattgaaaaaatgcaa
tctgatacccaagaggcaaacgacattgtgaccctggcaaatttgcaatataatggcagt
acacctgcagatgcatttgaaacaaaagtcacaaacattatcgacagactgaacaataat
ggcattcatatcaataacaaggtcgcatgccaattaattatgagaggtctatctggcgaa
tataaatttttacgctacacacgtcatcgacatctaaatatgacagtcgctgaactgttc
ttagatatccatgctatttatgaagaacaacagggatcgagaaacagcaaacctaattac
aggagaaatccgagtgatgagaagaatgattctcgcagctatacgaatacaaccaaaccc
aaagttatagctcggaatcctcaaaaaacaaataattcgaaatcgaaaacagccagggct
cacaatgtatccacatctaataactctcccagcacggacaacgattccatcagtaaatca
actactgaaccgattcaattgaacaataagcacgaccttcatcttggccagaaacttact
gaatctacagtaaatcatactaatcattctgatgatgaactccctggacacctccttctc
gattcaggagcatcacgaacccttataagatctgctcatcacatacactcagcatcatct
aatcctgacataaacgtagttgatgctcaaaaaagaaatataccaattaacgctattggt
gacctacaatttcacttccaggacaacaccaaaacatcaataaaggtattgcacactcct
aacatagcctatgacttactcagtttgaatgaattggctgcagtagatatcacagcatgc
tttaccaaaaacgtcttagaacggtctgacggcactgtacttgcacctatcgtaaaatat
ggagacttttactgggtatctaaaaagtacttgcttccatcaaatatctccgtacccacc
atcaataatgtccatacaagtgaaagtacacgcaaatatccttatcctttcattcatcga
atgcttgcacatgccaatgcacagacaattcgatactcacttaaaaataacaccatcacg
tattttaacgaatcagatgtcgactggtctagtgctattgactatcaatgtcctgattgt
ttaatcggcaaaagcaccaaacacagacatatcaaaggttcacgactaaaataccaaaat
tcatacgaaccctttcaatacctacatactgacatatttggtccagttcacaacctacca
aaaagtgcaccatcctatttcatctcatttactgatgagacaacaaaattccgttgggtt
tatccattacacgaccgtcgcgaggactctatcctcgatgtttttactacgatactagct
tttattaagaaccagtttcaggccagtgtcttggttatacaaatggaccgtggttctgag
tatactaacagaactctccataaattccttgaaaaaaatggtataactccatgctataca
accacagcggattcccgagcacatggagtcgctgaacggctcaaccgtaccttattagat
gactgccgtactcaactgcaatgtagtggtttaccgaaccatttatggttctctgcaatc
gaattttctactattgtgagaaattcactagcttcacctaaaagcaaaaaatctgcaaga
caacatgctggcttggcaggacttgatatcagtactttgttacctttcggtcaacctgtt
atcgtcaatgatcacaaccctaactccaaaatacatcctcgtggcatcccaggctacgct
ctacatccgtctcgaaactcttatggatatatcatctatcttccatccttaaagaagaca
gtagatacaactaactatgttattcttcagggcaaggaatccagattagatcaattcaat
tacgacgcactcactttcgatgaagacttaaaccgtttaactgcttcatatcaatcgttc
attgcgtcaaatgagatccaacaatccgatgatcttaacatagaatctgaccatgacttc
caatctgacatcgaactacatcctgagcaaccgagaaatgtcctttcaaaagctgtgagt
ccaaccgattccacacctccgtcaactcatactgaagattcgaaacgtgtttctaaaacc
aatattcgcgcacccagagaagttgaccccaacatatctgaatctaatattcttccatca
aagaagagatctagcaccccccaaatttccaatatcgagagtaccggttcgggtggtatg
cataaattaaatgttcctttacttgctcccatgtcccaatctaacacacatgagtcgtcg
cacgccagtaaatctaaagatttcagacactcagactcgtacagtgaaaatgagactaat
catacaaacgtaccaatatccagtacgggtggtaccaacaacaaaactgttccgcagata
agtgaccaagagactgagaaaaggattatacaccgttcaccttcaatcgatgcttctcca
ccggaaaataattcatcgcacaatattgttcctatcaaaacgccaactactgtttctgaa
cagaataccgaggaatctatcatcgctgatctcccactccctgatctacctccagaatct
cctaccgaattccctgacccatttaaagaactcccaccgataaattctcatcaaactaat
tccagtttgggtggtattggtgactctaatgcctatactactatcaacagtaagaaaaga
tcattagaagataatgaaactgaaattaaggtatcacgagacacatggaatactaagaat
atgcgtagtttagaacctccgagatcgaagaaacgaattcacctgattgcagctgtaaaa
gcagtaaaatcaatcaaaccaatacggacaaccttaagatacgatgaggcaatcacctat
aataaagatattaaagaaaaggaaaaatatatcgaagcataccacaaagaagtcaaccaa
ctattgaaaatgaatacttgggacactgacaaatattatgacagaaaagaaatagaccct
aaaagagtaataaattcaatgtttatcttcaacaggaaacgtgacggtactcataaagct
agatttgttgcaagaggtgatattcagcatcctgacacttacgactcaggcatgcaatcc
aataccgtacatcactatgcattaatgacatccctgtcacttgcattagacaataactac
tatattacacaattagacatatcttcggcatatttgtatgcagacatcaaagaagaatta
tacataagacctccaccacatttaggaatgaatgataagttgatacgtttgaagaaatca
ctttatggattgaaacaaagtggagcgaactggtacgaaactatcaaatcatacctgata
aaacagtgtggtatggaagaagttcgtggatggtcatgcgtatttaagaatagtcaagta
acaatttgcttattcgttgatgatatgatattgttcagcaaagacttaaatgcaaataag
aaaatcataacaacactcaagaaacaatacgatacaaagataataaatctgggtgaaagt
gataacgaaattcagtacgacatacttggcttagaaatcaaatatcaaagaggtaaatac
atgaaattaggtatggaaaactcattaactgagaaaatacccaaattaaacgtacctttg
aatccaaaaggaagaaaacttagcgctccaggtcaaccaggtctttatatagaccaggat
gaactagaaatagatgaagatgaatacaaagagaaggtacatgaaatgcaaaagttgatt
ggtctagcttcatatgttggatataaatttagatttgacttactatactacatcaacaca
cttgctcaacatatactattcccctctaggcaagttttagacatgacatatgagttaata
caattcatgtgggacactagagataaacaactgatatggcacaaaaacaaacctaccgag
ccagataataaactagtcgcaataagtgatgcttcatatggtaaccaaccatattacaag
tcacaaattggcaacatatatttacttaatggaaaggtaattggaggaaagtccaccaag
gcttcattaacatgtacttcaactacggaagcagaaatacacgcgataagtgaatctgtc
ccattattaaataacctcagtcaccttgtgcaagaacttaacaagaaaccaattactaaa
ggattactaaccgacagtaaatctacaatcagtataattatatccaataatgaagagaaa
tttagaaacagattttttggtactaaagcaatgagactaagagatgaagtatcaggaaat
catctgcacgtatgctatatcgaaaccaaaaagaatattgcagacgtaatgaccaaacct
cttccgataaaaacattcaaactattaacaaacaaatggattcattag

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