KEGG T00005: YNL221C

Saccharomyces cerevisiae (budding yeast): YNL221C

Entry

YNL221C           CDS       T00005

Symbol

POP1

Name

(RefSeq) ribonuclease P/MRP protein subunit POP1

K01164

ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]

Organism

sce Saccharomyces cerevisiae (budding yeast)

Pathway

sce03008

Ribosome biogenesis in eukaryotes

Brite

KEGG Orthology (KO) [BR:sce00001]
09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    YNL221C (POP1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sce03009]
    YNL221C (POP1)
   03016 Transfer RNA biogenesis [BR:sce03016]
    YNL221C (POP1)
   03029 Mitochondrial biogenesis [BR:sce03029]
    YNL221C (POP1)
Enzymes [BR:sce01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     YNL221C (POP1)
Ribosome biogenesis [BR:sce03009]
Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     YNL221C (POP1)
Transfer RNA biogenesis [BR:sce03016]
Eukaryotic type
  5'processing factors
   Ribonucrease P
    YNL221C (POP1)
Mitochondrial biogenesis [BR:sce03029]
Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    YNL221C (POP1)

SSDB

Motif

Pfam:

POP1_N POPLD POP1_C

Other DBs

NCBI-GeneID:

855500

NCBI-ProteinID:

NP_014178

SGD:	S000005165

UniProt:

P41812

Structure

Position

XIV:complement(231068..233695)

AA seq 875 aa
MSGSLSRGNGGKKVLNKNQLLKRNRIRNARSIRAEAVAASSTKTGTPSDLSESGSKLNVD
QFISSRQFEVKQLQLAMHNSKAASSTRIFQALPRKLRRRTASHNVRRIPKRMRNRALREM
RKSDQQDVLKGSSASSRKAHGLNAKQLYKARMSIKLLRLASKSTSMKLSMPPEVTSSNCH
VRQKIKTLKRMIKESSTANPNIKLLNNRMGSYDCTGVNELAPIPKGRVKYTKRQKHFAWL
PTHIWNAKRSHMMKRWGYQMVWAPTQKCFKLTHRLGGDTCSSDGALCMDSSYIGTIIVKD
KSNDSEGDFLKSIIGKLTAERANLRKYREGQVLFQGLIYSFNEENGEDSTKPLGPCDVFW
VQKDTAIIRLHPSIYTQVFNILLQHKEKLTVQDCRYSLASVTLKGAKALESLASCLRSTE
YSKSFEQFKMVSMITDHNALPQRCTFAFEAIDPRHLAAPKKLNDSQRKTVNSDDILSLHE
NYPQDEINAVFNELCDPESRTQSYNNQNTLKEISARRYKLLTATPNSINKTTVPFKESDD
PSIPLVIIRRLKTRDWIVVLPWFWLLPLWHLLNRIPRMYHIGLRQFQQIQYENKQLYFPD
DYPFTQLGYIENSFYKKEASKTKWDRKPMGKRINFEKIKDIHNTKLPAYSGEIGDFFSSD
WRFLQILRNGIDYLQRNDKTLELMDSKKTGQFNAQGVRDINCVNDVLEFCKDYEAKTKAM
SLSIEENIPVALCKNRKCQFRTPDSISVNSSSFSLTFFPRCIIAVSCTLLERGHPKDNAR
IYQVPEKDLEHWLQLAKGVYRPNGRKDHDLKIPLPEVHDLIGFITSGTYHLNCGNGMGIG
FIDHHAAIRQPTRYVLIRNVGTNTYRLGEWSKISV

NT seq 2628 nt +upstreamnt +downstreamnt
atgagcgggagtttgtctagaggaaatggtggaaagaaagttcttaataagaatcaatta
ctgaagcgaaatcgcataagaaatgctagatcaattagagcagaggccgtggccgcttca
tcaacaaaaactgggacaccgagtgatctgagtgaatcgggaagtaagctaaacgtggac
caattcattagttctcgacaattcgaggttaagcagttgcaattggccatgcataattcc
aaagcagccagctcaacgagaatatttcaggcattgcctcgaaaattgcgtcgtagaacg
gcttcgcataatgttcgtagaattccaaaaagaatgcgcaatagagctttgagggaaatg
cgtaaaagtgatcagcaggatgtgttgaaggggtcttcagcctcttccagaaaagctcat
ggcctaaatgcaaagcaactttataaagctagaatgtccataaagctgctacgattggct
agcaaatctacttctatgaaactcagcatgccaccagaggttacatcatctaactgccac
gtaaggcagaaaatcaagacattaaagcgaatgattaaagaatcatcaacagcaaatcca
aatataaagttacttaataatcgtatggggagctatgattgcactggtgtcaatgaatta
gcacctattcccaagggcagggtcaaatatacgaagagacagaagcactttgcttggcta
cccacccacatttggaatgctaaaaggtcgcacatgatgaaaagatggggatatcaaatg
gtatgggcacctactcaaaaatgctttaaattgacgcataggttgggcggtgatacctgc
agctccgatggggccttatgcatggattcaagttatattggtacaataattgtaaaagac
aaaagcaatgacagtgagggggactttttaaaatccattataggaaagttaacagctgaa
agagcaaacttaaggaaatatcgcgaaggccaggttttattccaagggttaatttatagt
ttcaatgaagaaaacggtgaggattctactaagccactgggtccatgcgacgtattttgg
gtacaaaaggatactgcaattataaggttacacccttcaatttatactcaggtttttaac
attcttttgcaacataaggaaaaactaacagtacaagattgtcgatattcattagcaagc
gtgacattgaagggagctaaagctctagagtcattagcatcgtgtttaaggagcacagag
tactctaaatcgtttgaacaatttaaaatggtttcaatgattaccgatcataatgcccta
ccacagaggtgtacgtttgcatttgaagccatagatccgcgtcatctagctgctccaaag
aaattaaatgattcacagaggaagactgttaattctgacgacattttatcactgcatgaa
aactatcctcaagacgaaataaacgccgtttttaacgaattatgtgaccctgaatcacgt
actcaatcatacaacaaccaaaacacattaaaagaaatttctgcgagacgttacaaattg
ctaactgccacaccgaacagcatcaataaaactacagtcccgttcaaagaaagtgacgat
ccttctattccattagtcataataagaaggctcaagaccagggattggattgttgtgtta
ccatggttctggctgctaccgttatggcatctactgaaccggataccaaggatgtatcac
attggcctcaggcaattccagcaaattcagtacgagaataagcaattatattttccggat
gattatccattcactcaattgggttatatagaaaactcattttataaaaaggaggcctcc
aagacgaagtgggataggaagccaatgggaaaaaggattaatttcgagaagatcaaagac
atccataacactaaattaccggcatatagcggagaaatcggcgattttttcagttcagac
tggagatttttacaaatactgagaaatggaattgattatttacagcggaatgataaaacc
ttagaactgatggacagtaagaagaccgggcaatttaacgctcagggtgtaagagacatc
aactgtgtaaatgatgttttggagttttgcaaagattatgaagccaagaccaaggctatg
tcgttgtcgattgaagagaacataccagttgcattgtgtaaaaatcggaaatgtcaattt
cgcactcctgatagcattagcgtcaatagttcttcattctcccttacattcttcccacgt
tgtatcattgctgtatcttgcacactactcgaacgaggtcacccaaaggacaatgcaaga
atatatcaagttccagaaaaggacttagagcattggctacaattggcaaaaggggtttac
cgcccaaacggaagaaaagatcatgatttgaaaattccacttccagaggtacatgatttg
attggttttattaccagcggcacctaccacttaaattgtggaaatggtatgggaatcgga
tttatagatcatcatgcggccatccggcaaccaactaggtatgtactgatcagaaatgta
ggtaccaacacttataggttgggggagtggtcgaaaatatccgtataa

All links

Gene (28)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (5)   
   PDB (5)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

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