KEGG   Saccharomyces cerevisiae (budding yeast): YOR159CHelp
Entry
YOR159C           CDS       T00005                                 

Gene name
SME1
Definition
(RefSeq) mRNA splicing protein SME1
  KO
K11097  small nuclear ribonucleoprotein E
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03040  Spliceosome
Module
sce_M00351  Spliceosome, U1-snRNP
sce_M00398  Sm core complex
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    YOR159C (SME1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sce03041]
    YOR159C (SME1)
   03032 DNA replication proteins [BR:sce03032]
    YOR159C (SME1)
Spliceosome [BR:sce03041]
 Complex A
  U1 snRNP components
   Sm proteins
    YOR159C (SME1)
  U2 snRNP components
    YOR159C (SME1)
 Complex B
  U1 snRNP components
    YOR159C (SME1)
  U4/U6.U5 tri-snRNP components
    YOR159C (SME1)
 Complex C
  U2 snRNP components
    YOR159C (SME1)
DNA replication proteins [BR:sce03032]
 Eukaryotic Type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     YOR159C (SME1)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LSM Hfq
Motif
Other DBs
NCBI-GeneID: 854330
NCBI-ProteinID: NP_014802
SGD: S000005685
UniProt: Q12330
Structure
PDB: 

Position
XV:complement(633282..633566)
Genome map
AA seq 94 aa AA seqDB search
MSNKVKTKAMVPPINCIFNFLQQQTPVTIWLFEQIGIRIKGKIVGFDEFMNVVIDEAVEI
PVNSADGKEDVEKGTPLGKILLKGDNITLITSAD
NT seq 285 nt NT seq  +upstreamnt  +downstreamnt
atgtcgaacaaagttaaaaccaaggccatggtgccaccaataaattgcatatttaacttc
ttacaacagcaaacaccagtaacgatatggttattcgagcaaatcggcataagaatcaag
ggtaaaatagttggatttgatgagttcatgaatgttgtcatcgatgaagccgtggaaatt
cctgtgaatagtgccgatggtaaagaagatgtggagaagggcacgcccttggggaagatc
ctgttgaaaggcgataatatcacattgataacatcagcggactga

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