KEGG   Saccharomyces cerevisiae (budding yeast): YOR204WHelp
Entry
YOR204W           CDS       T00005                                 

Gene name
DED1, SPP81
Definition
(RefSeq) DEAD-box ATP-dependent RNA helicase DED1
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:3.6.4.13]
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:sce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sce03019]
    YOR204W (DED1)
   03041 Spliceosome [BR:sce03041]
    YOR204W (DED1)
   03036 Chromosome and associated proteins [BR:sce03036]
    YOR204W (DED1)
Enzymes [BR:sce01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     YOR204W (DED1)
Messenger RNA biogenesis [BR:sce03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     YOR204W (DED1)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     YOR204W (DED1)
Spliceosome [BR:sce03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    YOR204W (DED1)
Chromosome and associated proteins [BR:sce03036]
 Eukaryotic Type
  Gene silencing
   RISC (RNA-induced silencing complex)
    YOR204W (DED1)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C CMS1
Motif
Other DBs
NCBI-GeneID: 854379
NCBI-ProteinID: NP_014847
SGD: S000005730
UniProt: P06634
Position
XV:722911..724725
Genome map
AA seq 604 aa AA seqDB search
MAELSEQVQNLSINDNNENGYVPPHLRGKPRSARNNSSNYNNNNGGYNGGRGGGSFFSNN
RRGGYGNGGFFGGNNGGSRSNGRSGGRWIDGKHVPAPRNEKAEIAIFGVPEDPNFQSSGI
NFDNYDDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGR
DLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQ
IFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANV
KYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSDYI
FLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGLTLIFVETKRMADQLTDFLI
MQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHVINYDLPSDV
DDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFLKDAMMSAPGSR
SNSRRGGFGRNNNRDYRKAGGASAGGWGSSRSRDNSFRGGSGWGSDSKSSGWGNSGGSNN
SSWW
NT seq 1815 nt NT seq  +upstreamnt  +downstreamnt
atggctgaactgagcgaacaagtgcaaaatttaagcatcaacgacaacaacgagaatggt
tatgttcctcctcacttaagaggaaaaccaagaagtgccagaaataacagtagcaactac
aataacaacaacggcggctacaacggtggccgtggcggtggcagcttctttagcaacaac
cgtcgtggtggttacggcaacggtggtttcttcggtggaaacaacggtggcagcagatct
aacggccgttctggtggtagatggatcgatggcaaacatgtcccagctccaagaaacgaa
aaggccgagatcgccatatttggtgtccccgaggatccaaatttccaatcttctggtatt
aacttcgataactacgatgatattccagtggacgcctctggtaaggatgttcctgaacca
atcacagaatttacctcacctccattggacggattgttattggaaaacatcaaattggcc
cgtttcaccaagccaacacctgtgcaaaaatactccgtccctatcgttgccaacggcaga
gatttgatggcctgtgcgcagaccggttctggtaagactggtgggtttttattcccagtg
ttgtccgaatcatttaagactggaccatctcctcaaccagagtctcaaggctccttttac
caaagaaaggcctacccaactgctgtcattatggctccaactagagagttggccacccaa
attttcgatgaagccaagaaatttacttatagatcctgggtcaaggcctgcgtcgtctac
ggtggttctccaattggtaaccaactaagagaaattgaacgtggttgcgatcttttagtc
gctactccaggtcgtttgaatgacttgttggaacgtggtaaaatttctttggccaacgtc
aagtatttggttctagatgaagctgatagaatgttggatatgggtttcgaacctcaaatt
agacatattgtcgaagactgtgatatgactcctgttggtgaaagacaaactctgatgttc
tcagctacttttcccgctgatatccaacatttggcccgtgatttcttaagtgactacatc
tttttgtctgttggtagagtcggttctacttcagaaaacattactcaaaaagtcttatac
gttgaaaatcaagataagaagtcagccttattggatctattgtctgcatccactgacggt
ttgactttgatctttgtcgaaactaagagaatggcagatcaattgaccgatttcctgatc
atgcaaaactttagagctaccgccattcatggtgaccgtacccaatctgagagagaacgt
gccttggccgccttcagatctggtgccgctactttattggttgccacagctgtcgcagct
agaggtctagatattccaaacgtcacccacgttatcaactacgatttaccaagtgatgtc
gatgattacgtccatagaattggtagaactggtcgtgccggtaacaccggtcttgccact
gcctttttcaacagtgaaaacagtaacattgttaaaggtttgcatgaaattttgactgaa
gctaaccaagaagtcccatcattcttgaaggacgctatgatgagtgctccaggtagcaga
agcaacagccgtagaggcggtttcggtcgcaacaacaacagagattaccgtaaggccgga
ggcgctagcgcaggcggctggggctcttcaagaagcagagataactctttcagaggcggt
agtggctggggtagcgattccaagtcttctggctggggtaacagcggtggttcaaacaac
tcttcttggtggtga

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