KEGG   Saccharomyces cerevisiae (budding yeast): YOR217W
Entry
YOR217W           CDS       T00005                                 
Symbol
RFC1, CDC44
Name
(RefSeq) replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03030  DNA replication
sce03410  Base excision repair
sce03420  Nucleotide excision repair
sce03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    YOR217W (RFC1)
   03410 Base excision repair
    YOR217W (RFC1)
   03420 Nucleotide excision repair
    YOR217W (RFC1)
   03430 Mismatch repair
    YOR217W (RFC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sce03032]
    YOR217W (RFC1)
   03400 DNA repair and recombination proteins [BR:sce03400]
    YOR217W (RFC1)
DNA replication proteins [BR:sce03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    YOR217W (RFC1)
DNA repair and recombination proteins [BR:sce03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     YOR217W (RFC1)
SSDB
Motif
Pfam: RFC1 AAA BRCT RuvB_N Rad17 AAA_22 AAA_16 AAA_33 AAA_assoc_2 AAA_17 AAA_18 RNA_helicase AAA_14 AAA_24 AAA_5 NACHT NTPase_1 Ilar_coat
Other DBs
NCBI-GeneID: 854392
NCBI-ProteinID: NP_014860
SGD: S000005743
UniProt: P38630
Structure
Position
XV:749301..751886
AA seq 861 aa
MVNISDFFGKNKKSVRSSTSRPTRQVGSSKPEVIDLDTESDQESTNKTPKKMPVSNVIDV
SETPEGEKKLPLPAKRKASSPTVKPASSKKTKPSSKSSDSASNITAQDVLDKIPSLDLSN
VHVKENAKFDFKSANSNADPDEIVSEIGSFPEGKPNCLLGLTIVFTGVLPTLERGASEAL
AKRYGARVTKSISSKTSVVVLGDEAGPKKLEKIKQLKIKAIDEEGFKQLIAGMPAEGGDG
EAAEKARRKLEEQHNIATKEAELLVKKEEERSKKLAATRVSGGHLERDNVVREEDKLWTV
KYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKT
TAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFV
IIMDEVDGMSGGDRGGVGQLAQFCRKTSTPLILICNERNLPKMRPFDRVCLDIQFRRPDA
NSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVINLLSTISTTTKTINHENINEIS
KAWEKNIALKPFDIAHKMLDGQIYSDIGSRNFTLNDKIALYFDDFDFTPLMIQENYLSTR
PSVLKPGQSHLEAVAEAANCISLGDIVEKKIRSSEQLWSLLPLHAVLSSVYPASKVAGHM
AGRINFTAWLGQNSKSAKYYRLLQEIHYHTRLGTSTDKIGLRLDYLPTFRKRLLDPFLKQ
GADAISSVIEVMDDYYLTKEDWDSIMEFFVGPDVTTAIIKKIPATVKSGFTRKYNSMTHP
VAIYRTGSTIGGGGVGTSTSTPDFEDVVDADDNPVPADDEETQDSSTDLKKDKLIKQKAK
PTKRKTATSKPGGSKKRKTKA
NT seq 2586 nt   +upstreamnt  +downstreamnt
atggtcaatatttctgatttctttggtaaaaataagaaatccgtaagatcgtcaacatcc
agacctacgagacaggtgggttcgtctaaaccagaagttatcgacttagatactgaatct
gaccaagaatcaaccaataaaacaccaaagaagatgcctgtaagtaatgtaattgatgta
tcagagacacctgaaggagaaaaaaagctacctcttcccgctaagaggaaggcctcttca
ccaactgtaaagccagcaagttcaaaaaaaaccaaaccctcctctaaaagttcagactcg
gcttcgaatattacggctcaagatgtactagataagattccatccttggatctgtcaaat
gttcatgtgaaagagaatgctaaatttgatttcaaaagcgcaaattcaaatgcggatcca
gatgaaattgtttctgaaataggtagttttccagaaggaaagccaaattgtttattaggt
ctaacaattgtcttcacaggtgttctgccaaccttggagcgtggtgcatcggaagcttta
gcgaaaagatacggagcaagggttactaaatcaatttcaagcaaaacttctgtagtagtc
ttaggtgatgaagcagggccaaagaaactagaaaaaatcaagcaattgaaaatcaaagcc
atagacgaagaaggctttaagcaattaattgctgggatgcctgctgaaggtggtgacggg
gaagctgccgaaaaagcacgtcgaaaattagaagaacagcataatattgctaccaaagaa
gcagaattgcttgttaagaaagaagaggaaaggtcgaagaagcttgcagccactagagtt
tctggtggccatctggagagagacaatgtggttagggaagaagataaattgtggacagta
aagtacgcaccaacgaatctacaacaggtctgtggtaacaaaggaagtgtaatgaaatta
aaaaactggttggctaattgggaaaattcaaagaaaaatagttttaaacatgctggtaaa
gatggctctggtgttttcagggctgcaatgttatacggtcctcctggtattgggaagaca
actgctgctcatttagttgcacaagagcttgggtatgacattcttgaacaaaacgcttct
gatgttcgctctaaaactttacttaatgccggtgttaaaaacgctcttgataacatgtct
gtagtgggatatttcaaacacaacgaagaagctcaaaatttgaacgggaaacattttgtc
attatcatggatgaagttgatggtatgagcggaggcgatagggggggagttggccagctg
gcacagttttgtcgtaagacgtcaactccattgattctaatttgtaatgaacgtaattta
ccaaaaatgagaccattcgatagagtatgtcttgatatccaatttagaagacctgatgct
aacagtatcaaatcaagattaatgacaattgcgatcagagaaaagttcaaacttgatcca
aatgtcattgataggttgatacagactacaagaggtgatatccgccaggttattaatcta
ctttcaacgatatctacgactactaaaaccataaaccatgaaaatatcaacgagatctca
aaggcatgggaaaagaatattgccctaaaaccctttgacattgcccataaaatgttggat
ggacaaatatactcagacataggttcaaggaactttacactgaatgataagatcgcatta
tattttgatgactttgatttcacacccctaatgattcaggaaaactatttatctacaaga
ccaagcgttttgaaacccggccagtcacatttggaagcagttgctgaggcggctaactgt
atttcattaggtgatattgtcgaaaagaagattcgtagtagtgagcaattatggagtctt
ttgcctttgcatgctgttctttcatctgtttatccagcatcaaaagttgccggccatatg
gcgggaagaatcaatttcacagcttggttgggccaaaattctaaatctgccaaatattat
aggttactgcaagagatacattatcatacaagactaggtacatctactgataaaattgga
ctaaggctggattacctaccaacttttagaaaaagattattggacccatttttgaagcaa
ggtgctgatgcaatttcatctgtcatagaggtaatggacgattactatttgaccaaagaa
gactgggattctattatggagtttttcgtaggtcctgatgtgaccacagccattatcaaa
aagataccagctacggttaaaagtggattcacgcggaaatacaacagtatgacacatcca
gtcgcaatttacagaacaggtagtactattggtggtggtggtgttggcaccagtactagc
acccccgatttcgaagatgtcgttgacgcagatgacaatccagttcccgcagatgatgaa
gaaacacaagatagtagcacagacttgaagaaggataaacttatcaagcagaaagccaaa
cctacgaagaggaagactgccaccagtaaacctggtggtagcaaaaaaaggaaaacgaaa
gcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (25)   
   PDB (25)   
Protein domain (18)   
   Pfam (18)   
All databases (79)   

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