KEGG   Saccharomyces cerevisiae (budding yeast): YOR341W
Entry
YOR341W           CDS       T00005                                 
Symbol
RPA190, RRN1
Name
(RefSeq) DNA-directed RNA polymerase I core subunit RPA190
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    YOR341W (RPA190)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sce03021]
    YOR341W (RPA190)
Enzymes [BR:sce01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     YOR341W (RPA190)
Transcription machinery [BR:sce03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     YOR341W (RPA190)
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 854519
NCBI-ProteinID: NP_014986
SGD: S000005868
UniProt: P10964
Structure
Position
XV:960987..965981
AA seq 1664 aa
MDISKPVGSEITSVDFGILTAKEIRNLSAKQITNPTVLDNLGHPVSGGLYDLALGAFLRN
LCSTCGLDEKFCPGHQGHIELPVPCYNPLFFNQLYIYLRASCLFCHHFRLKSVEVHRYAC
KLRLLQYGLIDESYKLDEITLGSLNSSMYTDDEAIEDNEDEMDGEGSKQSKDISSTLLNE
LKSKRSEYVDMAIAKALSDGRTTERGSFTATVNDERKKLVHEFHKKLLSRGKCDNCGMFS
PKFRKDGFTKIFETALNEKQITNNRVKGFIRQDMIKKQKQAKKLDGSNEASANDEESFDV
GRNPTTRPKTGSTYILSTEVKNILDTVFRKEQCVLQYVFHSRPNLSRKLVKADSFFMDVL
VVPPTRFRLPSKLGEEVHENSQNQLLSKVLTTSLLIRDLNDDLSKLQKDKVSLEDRRVIF
SRLMNAFVTIQNDVNAFIDSTKAQGRTSGKVPIPGVKQALEKKEGLFRKHMMGKRVNYAA
RSVISPDPNIETNEIGVPPVFAVKLTYPEPVTAYNIAELRQAVINGPDKWPGATQIQNED
GSLVSLIGMSVEQRKALANQLLTPSSNVSTHTLNKKVYRHIKNRDVVLMNRQPTLHKASM
MGHKVRVLPNEKTLRLHYANTGAYNADFDGDEMNMHFPQNENARAEALNLANTDSQYLTP
TSGSPVRGLIQDHISAGVWLTSKDSFFTREQYQQYIYGCIRPEDGHTTRSKIVTLPPTIF
KPYPLWTGKQIITTVLLNVTPPDMPGINLISKNKIKNEYWGKGSLENEVLFKDGALLCGI
LDKSQYGASKYGIVHSLHEVYGPEVAAKVLSVLGRLFTNYITATAFTCGMDDLRLTAEGN
KWRTDILKTSVDTGREAAAEVTNLDKDTPADDPELLKRLQEILRDNNKSGILDAVTSSKV
NAITSQVVSKCVPDGTMKKFPCNSMQAMALSGAKGSNVNVSQIMCLLGQQALEGRRVPVM
VSGKTLPSFKPYETDAMAGGYVKGRFYSGIKPQEYYFHCMAGREGLIDTAVKTSRSGYLQ
RCLTKQLEGVHVSYDNSIRDADGTLVQFMYGGDAIDITKESHMTQFEFCLDNYYALLKKY
NPSALIEHLDVESALKYSKKTLKYRKKHSKEPHYKQSVKYDPVLAKYNPAKYLGSVSENF
QDKLESFLDKNSKLFKSSDGVNEKKFRALMQLKYMRSLINPGEAVGIIASQSVGEPSTQM
TLNTFHFAGHGAANVTLGIPRLREIVMTASAAIKTPQMTLPIWNDVSDEQADTFCKSISK
VLLSEVIDKVIVTETTGTSNTAGGNAARSYVIHMRFFDNNEYSEEYDVSKEELQNVISNQ
FIHLLEAAIVKEIKKQKRTTGPDIGVAVPRLQTDVANSSSNSKRLEEDNDEEQSHKKTKQ
AVSYDEPDEDEIETMREAEKSSDEEGIDSDKESDSDSEDEDVDMNEQINKSIVEANNNMN
KVQRDRQSAIISHHRFITKYNFDDESGKWCEFKLELAADTEKLLMVNIVEEICRKSIIRQ
IPHIDRCVHPEPENGKRVLVTEGVNFQAMWDQEAFIDVDGITSNDVAAVLKTYGVEAARN
TIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQGMETSTSSFMKMSYETTCQ
FLTKAVLDNEREQLDSPSARIVVGKLNNVGTGSFDVLAKVPNAA
NT seq 4995 nt   +upstreamnt  +downstreamnt
atggatatttctaaaccggttggttctgaaatcacatccgttgatttcgggatcctaaca
gctaaagagattagaaatctatcagcaaagcaaattaccaatcctacggttttagataac
ttaggtcatccagtatcaggcggtttatatgacttagccttaggtgcattcttaaggaat
ctgtgttctacttgtggtttggatgaaaaattctgtccaggtcaccaaggtcacattgaa
ttacctgtcccttgttataatccattgttctttaaccagctatatatttatttgagggca
tcatgtttattctgtcatcatttccgtttaaagtcagtagaggttcatcgttacgcatgt
aaattgagattgttacaatacggtttgatagacgaatcttacaaactagatgaaataact
ttgggctctcttaatagcagtatgtacactgacgacgaagctattgaagataatgaggat
gaaatggatggtgaaggaagcaagcaatcaaaggatatttcctccactctcttaaatgaa
ctgaaaagtaagcgttcagaatatgttgacatggccatcgctaaagctttgtcagacggc
agaactactgagagaggctctttcacagctactgtaaatgatgaacgaaagaaattggtc
catgagtttcacaaaaaactattatctagaggtaagtgtgataactgtggtatgttttcg
ccaaaatttagaaaggatggttttacaaaaatcttcgaaactgcgttgaatgaaaaacaa
attacaaataacagagtaaaaggtttcattcgtcaagatatgattaagaagcaaaaacag
gctaagaaattggacggttctaacgaagcatctgcaaatgacgaagaaagttttgacgtt
ggtagaaatcctaccaccagaccaaaaaccggctcaacatatattttatctactgaagtg
aagaatattctggacactgttttcaggaaggagcaatgtgttttacaatatgtttttcat
tcgagacccaatttatcaagaaaattggtcaaggctgactctttttttatggatgttctt
gttgtgccaccaactagattccgtttgccttccaagcttggtgaagaagttcatgaaaac
tctcaaaaccaattgttgtccaaggttcttactacgtcattattaattagggacttaaat
gatgatttatctaagctacaaaaggacaaagtttctttggaagatagaagggtgatcttc
agtaggttaatgaatgcctttgttactattcaaaatgacgtcaatgcttttatcgactct
accaaagcacaaggtagaaccagtggtaaggttccaattcctggtgttaaacaagcactg
gaaaagaaagaaggtttattcagaaaacatatgatgggtaagcgtgttaactatgccgct
cgttctgttatttctccagacccaaatatcgaaactaatgaaattggtgtcccacctgtt
tttgctgttaaattgacttatccagaaccagtaacggcttataacatagcagagttgcgt
caagctgttattaatggccctgataaatggccaggtgccactcaaatacagaacgaagat
ggttctttggtctctttgatcggtatgtctgtagagcaacgtaaggcattagctaaccaa
ctattgacaccatcttcaaacgtttctactcatactttgaataaaaaggtttaccgtcac
atcaagaacagagatgttgttttaatgaaccgtcaaccgaccttacataaagcctccatg
atgggtcacaaagttagggtgttaccaaacgaaaagactttgagattacattatgctaat
acaggtgcttataatgcagatttcgatggtgatgaaatgaacatgcattttccacaaaac
gaaaatgctagagcagaagcactaaacttagctaatactgattctcaatacttgacacca
acttctggttctccagttagaggtttgattcaagatcatatttctgcgggtgtttggcta
acaagtaaggacagttttttcaccagagaacaataccagcaatatatttacggttgcatc
cgtcctgaggatggtcataccacaagatcgaagatcgttaccttacctccaactatcttc
aagccatatccattatggacaggtaaacaaatcatcacaacagttttgttgaatgtcacc
cctccagatatgcctggtatcaatttaatttctaaaaataagattaaaaacgaatattgg
ggcaagggatctctggaaaacgaagttctcttcaaagacggcgcattgctatgtggtatt
ttagataagtcacaatacggtgcctctaagtatggtattgttcattcattgcatgaagtt
tatggcccagaagtcgctgctaaagtcttatccgtcttaggtagactatttaccaactat
atcactgccacggcattcacttgtggtatggacgatttacgtctaacagcagaaggtaat
aaatggaggactgacatcttgaagacgtctgttgatacaggtcgtgaagccgctgcagaa
gttactaatttagataaagacacgccagcagatgacccagagttattaaagaggctacaa
gaaatactgcgtgataataataagtcaggtattcttgacgctgttacatcctccaaggtc
aatgctattacttctcaagtcgtctccaaatgtgttccagatggtactatgaaaaagttt
ccatgcaattctatgcaagctatggcactttctggtgctaaaggttctaacgttaatgtt
tctcaaattatgtgtttgttgggtcaacaagctttagaaggtagaagagtgccggtaatg
gttagtggtaaaactctgccttctttcaaaccttatgaaacagatgccatggctggtggt
tatgttaagggtcgtttctactctggtataaagccacaggagtattacttccattgtatg
gctggtcgtgaaggtttaattgatacggccgttaaaacatctagatccggttatttgcaa
cgttgtctaacaaaacaattagaaggtgttcacgtatcatacgataacagtataagagat
gcagatggtacgttagtgcaattcatgtatggtggtgatgccatcgatataaccaaagaa
tcacacatgactcaattcgagttctgtttagacaattactacgcattattgaagaaatac
aacccatcagcactgattgaacatttggatgttgaatcagctttgaagtactctaaaaag
actttgaaatacagaaagaagcatagcaaggagcctcattacaaacagtctgtaaaatat
gatcctgttttagctaagtataatcctgccaaatacctgggttccgtttctgagaacttc
caagataaactagaatctttcttagacaagaactctaaattgttcaaatcatcggatggt
gttaacgaaaagaagttcagggccttgatgcaattgaagtatatgcgttctctaattaat
ccaggtgaagctgttggtattattgcttcacaatctgtcggtgaaccctcaacacagatg
acattgaataccttccactttgctggtcacggtgccgctaatgtgacactaggtattcct
cgtttaagagaaattgttatgactgcctctgctgccattaaaactccgcaaatgactttg
cctatctggaatgatgtttctgatgagcaagctgacactttctgtaagtctatctcaaaa
gtcctattatccgaagtgatagataaagtgatagtcactgaaactaccggtacttcaaat
accgctggtggaaatgcagctcgttcgtatgttatccatatgagattcttcgacaataat
gaatacagtgaagaatacgatgtttctaaagaagaattacaaaacgtcatatctaatcaa
ttcatacacttgctagaagctgctattgtaaaagaaatcaaaaaacaaaagagaactaca
ggaccagacattggtgttgcagtaccaaggctacagacagatgttgcaaatagttcttcg
aactctaaaaggttggaagaggataatgatgaagaacaaagtcataagaaaactaaacaa
gcggtttcgtatgacgagccagatgaagatgaaattgaaactatgagagaagctgaaaag
tcttctgacgaagaaggtatcgattccgataaagaaagtgattctgactctgaggacgaa
gacgttgacatgaatgaacaaattaataagagtattgtggaagctaacaataatatgaac
aaagtgcagcgtgatcgtcaatcagcgattatttctcatcatagattcatcaccaaatac
aatttcgatgatgaatctggtaaatggtgtgaatttaagctagaattagcagcagacaca
gaaaagttgttgatggttaatattgttgaagaaatctgtaggaagtctatcattagacag
attcctcatattgaccgttgtgttcatccagaacctgaaaacggaaaacgtgtccttgtc
acagaaggtgttaatttccaagctatgtgggatcaagaggcatttatcgacgttgatggt
attacatctaatgatgttgctgctgtgttgaaaacgtacggtgtagaagctgctagaaat
actattgtgaatgaaattaataacgtcttctctcgttatgctatttctgtttctttccgt
catttagaccttattgctgacatgatgaccaggcaaggtacttacttagcctttaacaga
cagggtatggaaacatccacttcatctttcatgaagatgtcctatgaaactacatgtcaa
ttcttgaccaaggctgttctagataatgagcgtgaacaattggacagtccttccgctaga
attgtggtgggtaaattgaacaatgttggtacgggttcatttgatgtgttagcaaaggtt
ccaaatgcggcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (97)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (92)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (36)   
   PDB (36)   
Protein domain (5)   
   Pfam (5)   
All databases (148)   

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