KEGG   Saccharomyces cerevisiae (budding yeast): YOR343W-B
Entry
YOR343W-B         CDS       T00005                                 
Symbol
YOR343C-B
Name
(RefSeq) gag-pol fusion protein
Organism
sce  Saccharomyces cerevisiae (budding yeast)
SSDB
Motif
Pfam: TYA RVT_2 rve gag_pre-integrs Retrotran_gag_2
Other DBs
NCBI-GeneID: 854523
NCBI-ProteinID: NP_620389
SGD: S000007356
UniProt: Q12501
Position
XV:join(970578..971871,971873..975891)
AA seq 1770 aa
MESQQLHQNPHCPHGSAYASVTSKEVPSNQDPLAVSASNLPEFDRDSTKVNSQEETTPGT
SAVPENHHHVSPQPASVPPPQNGQYQQHGMMTPNKAMASNWAHYQQPSMMTCSHYQTSPA
YYQPDPHYPLPQYIPPLSTSSPDPIDSQDQHSEVPQAKTKVRNNVLPPHPHTSEENFSTW
VKFYIRFLKNSNLGDIIPNDQGEIKRQMTYEEHAYIYNTFQAFAPFHLLPTWVKQILEIN
YSDILTVLCKSVSKMQTNNQELKDWIALANLEYNGSTSADTFEITVSTIIQRLKENNINV
SDRLACQLILKGLSGDFKYLRNQYRTKTNMKLSQLFAEIQLIYDENKIMNLNKPSQYKQH
SEYKNVSRTSPNTTNTKVTTRNYHRTNSSKPRAAKAHNIATSSKFSRVNNDHINESTVSS
QYLSDDNELSLSQQQKESKPTRTIDSNDELPDHLLIDSGASQTLVRSAHYLHHATPNSEI
NIVDAQKQDIPINAIGNLHFNFQNGTKTSIKALHTPNIAYDLLSLSELTNQNITACFTRN
TLERSDGTVLAPIVKHGDFYWLSKKYLIPSHISKLTINNVNKSKSVNKYPYPLIHRMLGH
ANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEP
FQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKN
QFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRT
LLHCSGLPNHLWFSAVEFSTIIRNSLVSPKNDKSARQHAGLAGLDITTILPFGQPVIVNN
HNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQNNQTKLDQFDYDTL
TFDDDLNRLTAHNQSFIEQNETEQSYDQNTESDHDYQSEIEINSDPLVNDFSSQSLNPLQ
LDKEPVQKVRAPKEVDADISEYNILPSTIRSRTPHIINKESTEMGGTIESDTTSPRHSST
FTARNQKRPGSPNDMIDLTSQDRVNYGLENIKTTRLGGTEEPYIQRNSDTNIKYRTTNST
PSIDDRSSNSDSTTPIISIETKAACDNTPSIDTDPPEYRSSDHATPNIMPDKSSKNVTAD
SILDDLPLPDLTHKSPTDTSDVSKDIPHIHSRQTNSSLGGMDDSNVLTTTKSKKRSLEDN
ETEIEVSRDTWNNKNMRSLEPPRSKKRINLIAAIKGVKSIKPVRTTLRYDEAITYNKDNK
EKDRYVEAYHKEISQLLKMNTWDTNKYYDRNDIDPKKVINSMFIFNKKRDGTHKARFVAR
GDIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIRPP
PHLGLNDKLLRLRKSLYGLKQSGANWYETIKSYLINCCDMQEVRGWSCVFKNSQVTICLF
VDDMILFSKDLNANKKIITTLKKQYDTKIINLGEGDNEIQYDILGLEIKYQRSKYMKLGM
EKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQDELEIDEDEYKEKVHEMQKLIGLASY
VGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTKPDNKL
VAISDASYGNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAVSEAIPLLNN
LSHLVQELNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVY
YIETKKNIADVMTKPLPIKTFKLLTNKWIH
NT seq 5313 nt   +upstreamnt  +downstreamnt
atggaatcccaacaattacatcaaaatccacattgtccacatggtagcgcctatgcttcg
gttacttctaaggaagtcccatcaaatcaagatccgttagccgtttcagcttccaattta
ccggaatttgatagagattccactaaggttaattctcaagaagagacaacacctgggaca
tcagctgttccagagaaccatcatcatgtctctcctcaacctgcttcagtaccacctcca
cagaatggacagtaccaacagcacggcatgatgaccccaaacaaagctatggcttctaac
tgggcacattaccaacaaccatctatgatgacgtgttcacattatcaaacgtcacctgcg
tattatcaaccggacccacactatccgctgccacagtatatcccaccgctgagtacttcc
tcacctgatccaatcgattcacaggatcaacactctgaagtacctcaagctaagacaaag
gtgagaaataatgtcttaccaccacacccacacacatcagaagaaaacttttctacatgg
gttaaattttacatcagatttttgaagaactctaatctcggtgacattattccaaatgac
cagggtgaaatcaaaagacaaatgacttatgaagaacatgcgtatatatacaataccttc
caagcatttgccccatttcatttattgccaacatgggtaaaacaaattttagaaattaat
tattctgacatccttacagtcctttgtaaaagtgtgtccaaaatgcaaactaacaatcaa
gaattaaaagattggatagctcttgccaaccttgagtacaacggaagtacatctgctgat
acatttgaaattacagtcagcacgatcattcaaaggctaaaagaaaacaatatcaatgtt
agcgacagattggcctgtcaactaatacttaaaggtctatccggtgatttcaaataccta
cgtaatcaatatcgtaccaaaacgaacatgaaactttcccaattattcgctgaaattcaa
ttaatatatgacgaaaataaaatcatgaatctaaataaaccgtcccaatacaaacaacac
agcgaatacaaaaatgtttctcgcacatctccaaacacgactaacacgaaggttacaact
cgtaattatcatagaacaaatagttcaaaaccaagagcagcaaaagctcacaatattgct
acatccagtaaattctcaagggtgaacaatgatcacattaatgaatcaaccgtttcatca
caatacttaagcgatgacaacgaacttagtcttagccagcaacagaaagaatctaagcca
acacgcacaatagactcgaatgacgaactacctgatcaccttcttattgattcaggagct
tcgcaaacgcttgtcagatcagcccattatttacaccatgcaacacccaattctgaaata
aacatagtcgatgctcaaaaacaagacattcctataaatgccattggtaatcttcacttc
aactttcagaacggcaccaaaacatcaataaaagcactacacacaccaaacatagcctat
gatctattaagtttgagtgagctgactaaccaaaatattactgcctgctttaccagaaac
actttagaaagatcggatggtacagtactagctcccatagtcaaacatggagacttttac
tggttatctaaaaaatacctaattccttcgcacatttcaaagctaacaataaacaacgtc
aacaaaagcaaaagcgtaaataaatatccatatccgttaatacatcgaatgcttggacat
gctaacttccgaagtattcagaagtctcttaagaagaatgcagttacatatttgaaagaa
tcggatattgaatggtctaacgctagcacatatcaatgtcctgactgtctaatcggcaaa
agcacgaaacataggcatgtcaaaggatcacgactaaagtaccaagaatcatatgagcct
tttcagtacttgcataccgatatatttggtcctgtacatcacttaccgaaaagtgcacct
tcttactttatatcgtttacagatgagaaaaccagattccaatgggtgtacccattacac
gaccgtcgtgaagaatctatcctcaatgtttttacatcgatattagcatttattaagaac
caattcaatgctcgcgttctagttatccagatggatcgtggctccgagtacactaacaaa
actcttcataagttctttacgaacagaggtattactgcatgctatacaaccacggcagat
tctagagcacacggtgtcgctgaacgattaaatcgtactttattaaacgattgtcgcaca
ctgcttcattgcagtggtctaccaaatcatctatggttctcagcagtcgaattttctact
ataatcagaaattcattagtctcaccaaaaaacgataaatctgcaagacaacatgcaggt
ttagctggactggacattactactatactacctttcggtcaaccggttatagttaacaac
cataatcctgactcgaaaatacatcctcgtggcattccaggttacgccttacatccatca
cgaaactcttatggctatattatctatcttccatccttaaaaaagacagtagatactacc
aattacgttatattacaaaacaatcaaacgaaattggaccagttcgactacgatacactc
acttttgatgatgatctcaatcgtttaacagcccataaccaatcttttattgaacaaaat
gaaacggagcagtcatatgatcaaaatacagaatctgatcatgactatcaatcggagatt
gaaataaactctgatcctctagtgaacgatttctcgtcccaatcattgaaccctttacaa
ttagacaaggaaccagtccaaaaggtacgtgcaccaaaagaagttgatgccgacatatct
gaatacaatattcttccatctactatacgatctcgtacaccccatatcattaataaagag
agtaccgaaatgggtggtaccattgaatcagatactacttcacctagacactcgtctacc
ttcactgcacgaaaccaaaagcgacctggtagtcccaacgatatgattgatttgacctca
caggatagagttaattatggacttgaaaacatcaaaactacacgtttgggtggtacggag
gaaccatatattcaacgaaatagtgatacaaatatcaaatacaggactacaaacagtacg
ccctcaatagatgaccgttcgtccaacagtgactccactactcccatcatctccatagaa
acaaaggctgcatgtgataatacaccctccattgatacggatccgccagaatatcgctct
tctgaccatgcgactcctaatataatgcctgacaaatcctcaaaaaatgttacggctgat
tctattcttgacgacctcccacttcctgacttaacccataaatctcctacggacacttct
gatgtttcaaaagatatcccacacatacactctcgtcagactaattccagtttgggtggt
atggatgattctaatgttctgactactaccaaaagtaagaaaagatcattagaagataat
gaaactgaaattgaggtatcccgagacacatggaataataagaatatgagaagtctggaa
ccaccaagatcgaagaaacgcataaatttaattgcagcaataaaaggagtgaaatcgatc
aaaccagttcgaacgaccttaagatatgatgaagcaattacatataataaagacaacaaa
gaaaaagacagatatgttgaagcttatcataaagaaattagccaactattgaaaatgaac
acttgggatacaaacaaatattatgatagaaatgacatagatcctaaaaaagtaataaac
tcaatgtttatatttaacaagaaacgtgatggtacacacaaagctagatttgttgcaaga
ggcgacattcaacaccccgatacatatgattctgatatgcaatccaataccgtacatcac
tatgcactgatgacgtcattgtcaatcgcattagacaatgactattatatcacacagctg
gacatatcctctgcttacttatatgctgatatcaaagaagaattatacataagacctcca
ccacatttaggtttgaatgataagttactacgtttgagaaaatcactctatggtttgaaa
caaagtggtgcaaactggtatgaaaccattaaatcatatttaataaattgttgcgacatg
caagaagttcgcggatggtcatgcgtatttaagaatagtcaagtaacaatttgcttattc
gttgatgatatgatattattcagcaaagacttaaatgcaaataagaaaatcataacaaca
ctcaagaaacaatacgatacaaagataataaatctgggtgaaggtgataacgaaattcag
tacgacatacttggattagagatcaaatatcaaagaagcaagtacatgaaattaggtatg
gaaaaatccttgacagaaaaattacccaaactaaacgtacctttgaacccaaaaggaaag
aaacttagagctccaggtcaaccaggtcattatatagaccaggatgaactagaaatagat
gaagatgaatacaaagagaaagtgcatgaaatgcaaaagttgattggtctagcttcatat
gttggatataaatttagatttgacttactatactacatcaacacacttgctcaacatata
ctattcccctctaggcaagttttagacatgacatatgagttaatacaattcatgtgggac
actagagataaacaattaatatggcacaaaaacaaacctaccaagccagataataaacta
gtcgcaataagcgatgcttcatatggtaaccaaccatattacaagtcacaaattggtaac
attttcctactcaacggaaaagtgattggaggaaagtcgacaaaggcttcgttaacatgc
acttcaactacagaagcagaaatacacgcagtcagtgaagctataccgctattgaataac
ctcagtcaccttgtgcaagaacttaacaagaaaccaattattaaaggcttacttactgat
agtagatcaacgatcagtataattaagtctacaaatgaagagaaatttagaaacagattt
tttggcacaaaggcaatgagacttagagatgaagtatcaggtaataatttatacgtatac
tacatcgagaccaagaagaacattgctgatgtgatgacaaaacctcttccgataaaaaca
tttaaactattaacaaacaaatggattcattag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG GENES (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (52)   

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