KEGG   Saccharomyces cerevisiae (budding yeast): YPL045W
Entry
YPL045W           CDS       T00005                                 
Symbol
VPS16, CVT15, SVL6, VAM9, VPT16
Name
(RefSeq) tethering complex subunit VPS16
  KO
K20180  vacuolar protein sorting-associated protein 16
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce04138  Autophagy - yeast
sce04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:sce00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    YPL045W (VPS16)
   04148 Efferocytosis
    YPL045W (VPS16)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sce04131]
    YPL045W (VPS16)
Membrane trafficking [BR:sce04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    YPL045W (VPS16)
   Hops complex
    YPL045W (VPS16)
SSDB
Motif
Pfam: Vps16_N Vps16_C Thioredoxin_15
Other DBs
NCBI-GeneID: 856062
NCBI-ProteinID: NP_015280
SGD: S000005966
UniProt: Q03308
Structure
Position
XVI:467260..469656
AA seq 798 aa
MKNPSFDWERLKDVFYRSRAIGELKWPTQYEEFKCALSLTVIAVEIQDFIQVYNYFGQLL
GKINLQRIHEDIIKFEFDKDEKLILVTKSSIKIVKGWSPLTIESVPLQDPTIDTIWDYHN
GIMLLAKSRDIYKLNGNEWELLYENKDKKYNLLTKNHWSCNDDSIILLDVDHVYQVSTSN
GALLKLITDSSWHKVTISSRGFICLYNMKDNKLQIFRDPARILMEHNLDSTPDDICWCGN
DTVACSFEDEIKLYGPDGLYVTFWYPFTVTNLRAEVDGLKVITTEKIYFLSRVQPQTSNI
FRIGSTEPGAMLVDSFSLLEDHAPKAIEILKNFVLEKGVLDCIAAAIDEFEPKLQKMLLN
AASYGKASLQYKSFDASIFVNACNTIKLLNCFRSFGIFLTVEEYRCISLKGVIDRLLKYH
RYYECIQICKLANERFLLGYVFTEWAKDKIKGSPDMEDDELLDKIKSRLSVIDMTDTLQM
VAVAKVAYLEGRFQLSRNLALLEKNEEARIEQLYNLDDDSIALKECIKVQNYSLTISLLI
ALSKKLTNSQLTKLLIIDMFNNPLYLYYMRMDKAYLYDFYRQTDRFIDLAHVLLQQGKEQ
QSLHSFLPQIKDLYSQVQNSEVVNNTIEQLQRQEKLWIYQESLGKRFAISFTNMTLDQTL
SKLIETGQDKQVKEIVKKFKISEKKLYHLKCKTLVEAKKFDELLQFAQSRKSPIGYMPFY
TYLKSRGHMDKASPYVNMIPGLSYQEKKKLYVECRGFRDAIQLAGKEKDIPGLKEIYNII
PPNEPELKALANETMSRI
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgaaaaaccctagcttcgactgggaaagattgaaagacgtattttatagaagcagagcc
attggcgaattaaaatggccaactcagtacgaggagttcaaatgtgccttgtcattaact
gttatcgcggttgaaattcaagactttatacaagtatacaattattttgggcagctgtta
ggcaagataaatttgcaaagaattcatgaggatataataaagtttgagttcgataaagac
gagaagctgatattggtcacgaaaagctccatcaaaattgtgaaaggttggtcgccactg
acgatagaaagtgtcccattacaggacccaaccattgatactatctgggactatcacaat
ggaatcatgttgttagcaaaatctcgtgatatatacaagttaaacggaaatgaatgggaa
cttctttacgagaacaaagataaaaaatataatttattgacaaaaaaccactggagttgc
aatgatgactccatcattttactggatgttgatcatgtatatcaagtaagcacctcgaac
ggggcactattgaagttaatcacagattcgtcgtggcacaaggtaacgatctcatctaga
ggatttatttgcctttataatatgaaggacaataaactgcagattttcagagatccagca
agaatactaatggaacacaacttggattctacaccagatgatatatgttggtgtggcaat
gataccgttgcttgttctttcgaggacgaaatcaaattatacggcccagatggtttgtat
gtaacattttggtacccttttactgtaactaacctaagggcagaggttgatgggttgaag
gttattaccactgaaaagatttactttctatccagggtacaacctcagacttctaatata
tttagaattggctcaaccgagcctggtgcaatgcttgttgactcatttagtttactggag
gatcatgcacccaaagcaattgaaatattaaagaattttgtcttagagaagggtgtactg
gactgtattgctgctgcaatagacgaatttgaacctaaactacagaagatgttgttgaac
gctgcatcttatggaaaagcttctttgcagtacaagtcatttgacgctagtatatttgtg
aatgcgtgtaatacgataaaattattaaactgcttcagaagttttggtatttttttgact
gtggaggaatacaggtgtatttctttgaaaggtgtcattgataggctgttgaagtatcac
agatattatgagtgcatacagatatgcaaattggccaatgaacgatttctgttaggatac
gtgtttactgagtgggcaaaggataaaatcaagggtagtcctgacatggaagatgatgag
ttactagacaaaatcaaatctcgactaagtgttatagatatgacggatacattacaaatg
gtagcagttgcgaaagttgcatatcttgaaggaaggttccagttatcccgtaatttagct
ttattagagaaaaacgaagaagctagaattgagcaactgtataatcttgatgatgatagt
atagcgctaaaggagtgtatcaaagtacaaaattacagtctgacaatttcattactgatt
gcactttccaaaaagctgacaaactctcaactgacgaagcttttgatcattgatatgttc
aacaatcccttatatctctattatatgagaatggataaagcatacttgtacgatttttac
cgccaaactgaccgatttattgacttggctcacgtattactgcagcagggaaaagaacag
caatctttacacagctttttaccgcaaattaaggacctttatagccaagttcaaaacagt
gaagtggtcaacaatacaatagaacaacttcaaagacaggaaaagttgtggatataccaa
gaatcattaggcaaaagatttgctatatcattcactaatatgactttagatcaaacgctt
tcgaagttaatagaaacagggcaagataaacaggtgaaagaaatagttaaaaagttcaaa
ataagcgaaaaaaagctgtatcacctgaaatgtaaaacgttagtcgaagctaagaagttt
gacgaactactacagtttgctcagtcgcggaaatcaccaattggttacatgcctttctac
acatacttaaaaagcagaggccatatggataaagctagtccttatgttaatatgatacct
ggcctttcgtatcaggaaaagaaaaagctttatgtggagtgcaggggttttcgtgatgca
attcaactagcaggaaaggaaaaagacattccaggcttaaaggagatatataatattata
ccacctaatgagccggaattaaaggcattagcaaatgaaactatgagcaggatatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (3)   
   Pfam (3)   
All databases (45)   

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