KEGG   Streptococcus parasanguinis FW213: Spaf_0145
Entry
Spaf_0145         CDS       T02115                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha chain
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
scf  Streptococcus parasanguinis FW213
Pathway
scf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:scf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Spaf_0145 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scf03021]
    Spaf_0145 (rpoA)
   03400 DNA repair and recombination proteins [BR:scf03400]
    Spaf_0145 (rpoA)
Enzymes [BR:scf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Spaf_0145 (rpoA)
Transcription machinery [BR:scf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Spaf_0145 (rpoA)
DNA repair and recombination proteins [BR:scf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Spaf_0145 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L Corazonin RAD51D_N
Other DBs
NCBI-ProteinID: AFJ25173
UniProt: I1ZJE9
Position
144552..145490
AA seq 312 aa
MIEFEKPNITKIDENKDYGVFVVEPLERGYGTTLGNSLRRVLLASLPGAAVTSINIEGVL
HEFDTVPGVREDVMQIILNVKGIAVKSYVQDEKIIELDVEGPAEVTAGDILTDSDIEIVN
PDHYLFTIGGGASLKATLTVNSGRGYVPADQNKKDDAPVGTLAVDSIYTPVTKVNYQVEP
ARVGSNDGFDKLTLEILTNGTIIPEDALGLSARILTEHLNLFTNLTEIAIATDVMKEVDT
TSDDRILERTIEELDLSVRSYNCLKRAGINTVYDLTEKSEAEMMKVRNLGRKSLEEVKIK
LADLGLGLKNDK
NT seq 939 nt   +upstreamnt  +downstreamnt
atgattgagtttgaaaaaccaaatataacaaaaattgatgaaaacaaagattatggcgtg
tttgtcgtagaaccacttgaacgtggttatggtacaacacttggaaactcacttcgtcgt
gtacttctggcttcacttccaggtgcagctgtcacttcaatcaacattgaaggtgtactc
cacgaatttgataccgttccaggagtccgtgaagacgttatgcaaattattcttaacgtt
aaagggatcgccgttaaatcttacgtccaagacgaaaagattattgaacttgatgtagaa
ggacctgcagaagtaactgctggagatattcttactgatagtgacatcgaaattgtaaac
cctgatcattatctatttacaatcggaggaggagcatctttgaaagcaacgcttactgta
aacagtggacgtggctatgttccagctgatcaaaacaaaaaagatgatgcaccagtggga
acacttgctgtagattcaatctatacgccagtgacaaaagtcaattaccaagttgaacca
gcacgcgttggtagcaacgatggatttgacaagctaacccttgaaattttgacaaatggg
acaattattccagaagatgccttaggtttgtctgcccgtattttgacagaacacctaaat
ctattcacaaacttaactgaaattgctattgcgacagatgttatgaaggaagtagataca
acttctgatgatcgcattttagaacgtacgatcgaagaattagatctttcagttcgttca
tataactgtttgaaacgtgctggcatcaatactgtttacgatttgactgaaaaatcagaa
gcagaaatgatgaaagttcgtaacttgggacgtaagagtctagaagaagttaaaatcaaa
cttgccgacttaggccttgggttaaaaaacgataaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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