KEGG   Staphylococcus chromogenes: DWB92_03100
Entry
DWB92_03100       CDS       T06648                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
schr  Staphylococcus chromogenes
Pathway
schr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:schr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DWB92_03100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:schr03021]
    DWB92_03100
   03400 DNA repair and recombination proteins [BR:schr03400]
    DWB92_03100
Enzymes [BR:schr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     DWB92_03100
Transcription machinery [BR:schr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     DWB92_03100
DNA repair and recombination proteins [BR:schr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      DWB92_03100
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L DUF961 HHH_5
Other DBs
NCBI-ProteinID: QDW81844
Position
678167..679111
AA seq 314 aa
MIEIEKPRIETIEVSDDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEG
VLHEFSAIDNVVEDVSTIIMNIKKLALNIYSEEEKTLEIDVKEEGEVTAKDITHDSDVEI
LNPDLKIATVSKGGHFKMRLVANKGRGYALADQNNSSDLPIGVIPVDSLYSPVERVNYTV
ENTRVGQSSDFDKLTLDVWTDGSITPQEAVSLAAKIMTEHLNIFVGLTDEAQNAEIMIEK
EEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVK
YKLEDLGLGLRKED
NT seq 945 nt   +upstreamnt  +downstreamnt
atgatagaaatcgagaaacctagaattgaaacaattgaagttagtgatgatgctaaattc
ggtaagtttgttgttgaaccacttgaacgtggttacggtactacactaggaaactcctta
cgtcgtatcctactatcatcattaccaggtgcggctgtgaaatacatcgaaatcgaaggt
gttttacacgaattctcagcgattgataacgttgtagaagatgtttctacgattatcatg
aatattaaaaagttagcacttaatatttactctgaagaagaaaaaacattagaaatcgat
gtaaaagaagaaggcgaagtcactgccaaagatattacacacgacagtgatgttgaaatc
ttaaatcctgaccttaaaattgccactgtatcaaaaggtggacatttcaaaatgcgttta
gtcgctaataagggccgtggatatgcattagctgatcaaaacaactcaagtgatttacca
attggtgttattccagtggattcactttactcaccagtggaacgtgtgaattacacagtt
gagaatacacgtgtcggtcaaagctctgacttcgataagttaactttagatgtgtggact
gatggttcaatcacaccacaagaagctgtctcattagctgcaaaaatcatgactgagcat
ttaaacatttttgttggtttaactgacgaagcgcaaaatgctgaaattatgattgaaaaa
gaagaagatcaaaaagaaaaagtacttgaaatgtctatcgaagaattagacttatctgta
cgttcttacaactgtcttaaacgtgctggtattaactcagtgcaagaactcgctgacaaa
tcagaggctgatatgatgaaagtgcgtaacttaggtcgcaagtctcttgaagaagttaaa
tacaaattagaagacttaggtttaggtctaagaaaagaagattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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