KEGG   Streptomyces collinus: B446_13485
Entry
B446_13485        CDS       T02787                                 
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
  KO
K13328  dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:4.2.1.164]
Organism
sci  Streptomyces collinus
Pathway
sci00523  Polyketide sugar unit biosynthesis
sci01100  Metabolic pathways
sci01110  Biosynthesis of secondary metabolites
sci01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:sci00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    B446_13485
Enzymes [BR:sci01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.164  dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
     B446_13485
SSDB
Motif
Pfam: DegT_DnrJ_EryC1 Cys_Met_Meta_PP Beta_elim_lyase Aminotran_5
Other DBs
NCBI-ProteinID: AGS69515
UniProt: S5VMA9
Position
3111183..3112484
AA seq 433 aa
MSDTKARILSQVRDYHLEKESSQVFRPGVDEIWPSGAVLGPEDRAALVEAALDMKIAAGT
HSRRFESRFARYMKHRKAHLVNSGSSANLLALSALTSPHLEDRRLRPGDEVVTVAAGFPT
TVNPIIQNGLVPVFVDVELKTYNTTAERIKAAVGPKTRAIMIAHALGNPFEVADVARIAE
ENGLFLIEDNCDAVGSLHDGRLTGTFGDLTTVSFYPAHHLTMGEGGCVLTSNLALARIVE
SMRDWGRDCWCEPGENNRCFKRFEYQLGSLPAGYDHKYIYSHVGYNLKATDLQAALGLTQ
LAKVDAFTAARRHNWSRLREGLDGAPHLILPEATLNSEPSWFGFVITVAPDAPFTRKELV
DFLEARKIGTRNLFAGNLTRQPAYQDVPHRVVGDLTNSDIITEQTFWIGVYPGLTDEMTD
YMVASVREFLAGR
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgagtgacacgaaggcacggatactgagtcaggtgcgcgactaccacctggagaaggag
tcgtcgcaggtcttccgtcccggcgtcgacgagatctggccgtccggcgcggtgctcggc
cccgaggaccgggccgccctcgtggaggcggccctcgacatgaagatcgcggccggcacc
cactcccgccggttcgagtcgcgcttcgcccgctacatgaagcaccgcaaggcgcatctg
gtgaactccggctcgtcggcgaacctgctcgccctgtcggccctcacctcaccgcatctg
gaggaccgccggctccggcccggcgacgaggtcgtcacggtcgccgccggcttccccacg
accgtcaacccgatcatccagaacggcctcgtgcccgtcttcgtcgacgtcgagctgaag
acgtacaacaccacggccgagcgcatcaaggccgcggtcggcccgaagacccgcgccatc
atgatcgcgcacgcgctcggcaaccccttcgaggtcgccgacgtcgcgcgcatcgccgag
gagaacggcctcttcctcatcgaggacaactgcgacgccgtcggctccctgcacgacggc
cggctcaccggcaccttcggtgacctgacgaccgtcagcttctacccggcgcaccacctc
accatgggcgagggcggctgcgtgctcacctcgaacctcgcgctcgcccggatcgtcgag
tcgatgcgggactggggccgcgactgctggtgcgagcccggcgagaacaaccgctgcttc
aagcggttcgagtaccagctgggcagcctgccggccgggtacgaccacaagtacatctac
tcgcacgtgggctacaacctgaaggccaccgacctgcaggccgcactcgggctgacccag
ctggccaaggtcgacgcgttcaccgccgcccgccgtcacaactggagccggctgcgcgag
ggcctggacggcgccccgcacctgatcctgccggaggccacgctgaacagcgagcccagc
tggttcgggttcgtgatcacggtcgcccccgacgcgccgttcacccgcaaggagctggtg
gacttcctggaggcccgcaagatcggcacccgcaacctgttcgcgggcaacctcacccgg
cagcccgcctaccaggacgtgccgcaccgggtggtcggcgacctcaccaactcggacatc
atcaccgagcagaccttctggatcggcgtctatcccggcctcaccgacgagatgaccgac
tacatggtcgcgtccgtccgtgagttcctcgccggccggtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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