KEGG   Streptomyces collinus: B446_17480
Entry
B446_17480        CDS       T02787                                 
Symbol
groEL2
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
sci  Streptomyces collinus
Pathway
sci03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sci00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B446_17480 (groEL2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sci03019]
    B446_17480 (groEL2)
   03110 Chaperones and folding catalysts [BR:sci03110]
    B446_17480 (groEL2)
   03029 Mitochondrial biogenesis [BR:sci03029]
    B446_17480 (groEL2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sci04147]
    B446_17480 (groEL2)
Enzymes [BR:sci01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     B446_17480 (groEL2)
Messenger RNA biogenesis [BR:sci03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     B446_17480 (groEL2)
Chaperones and folding catalysts [BR:sci03110]
 Heat shock proteins
  HSP60 / Chaperonin
   B446_17480 (groEL2)
Mitochondrial biogenesis [BR:sci03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    B446_17480 (groEL2)
Exosome [BR:sci04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   B446_17480 (groEL2)
  Exosomal proteins of other body fluids (saliva and urine)
   B446_17480 (groEL2)
  Exosomal proteins of breast cancer cells
   B446_17480 (groEL2)
  Exosomal proteins of colorectal cancer cells
   B446_17480 (groEL2)
  Exosomal proteins of bladder cancer cells
   B446_17480 (groEL2)
SSDB
Motif
Pfam: Cpn60_TCP1 DUF4844 DUF5021 CbiA
Other DBs
NCBI-ProteinID: AGS70312
UniProt: S5VIF7
Position
complement(4038289..4039911)
AA seq 540 aa
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPMALKRGIE
KAVEAVSAALLEQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISAYFATDMERMEASLEDPYILIANSKISSVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGEVIS
EEVGLKLENATLDLLGRARKVVITKDETTIVDGAGSSDQVNGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
SSVFEKLDLEGDEATGANAVKLALEAPLKQIAVNGGLEGGVVVEKVRNLAVGHGLNAATG
EYVDMIAEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAAAAPGGMPGGDMDF
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggccaagatcatcgcgttcgacgaggaggcgcggcgcggcctcgagcgcggcatgaac
cagctcgcggacgccgtcaaggtgacgctcggccccaagggccgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgacggtgtctccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgccgagctggtcaaggaagtcgccaagaagacg
gacgacgtcgccggtgacggtacgaccaccgccaccgtgctcgcccaggccctggtcaag
gagggtctgcgcaacgtcgccgccggtgccaacccgatggccctgaagcgcggtatcgag
aaggccgtcgaggccgtctccgccgccctgctggagcaggcgaaggacgtggagacgaag
gagcagatcgcctccaccgcgtccatctccgccgccgacacccagatcggcgagctgatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagagcaacacc
ttcggtctggagctcgagctcaccgagggcatgcgcttcgacaagggctacatctccgcc
tacttcgccaccgacatggagcgcatggaggcgtcgctcgaggacccgtacatcctcatc
gcgaactccaagatcagctccgtcaaggacctgctcccgctgctggagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcgaccctg
gtcgtgaacaagatccgcggcaccttcaagtccgtcgccgtcaaggccccgggcttcggc
gaccgccgcaaggccatgctcggcgacatcgccatcctcacgggcggcgaggtcatctcc
gaggaggtcggcctcaagctggagaacgcgaccctggacctcctgggccgcgcccgcaag
gtcgtcatcaccaaggacgagaccaccatcgtcgacggtgccggttcctcggaccaggtc
aacggccgggtgaaccagatccgcgccgagatcgagaacagcgactcggactacgaccgc
gagaagctgcaggagcgcctggcgaagctcgccggcggtgtcgcggtcatcaaggccggt
gccgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggccgccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctgcaggcc
tcctcggtcttcgagaagctggacctggagggtgacgaggcgaccggcgccaacgccgtg
aagctcgcgctcgaggccccgctgaagcagatcgccgtcaacggtggtctcgagggtggc
gtcgtcgtggagaaggtgcgcaacctggccgtcggccacggtctgaacgccgccaccggc
gagtacgtcgacatgatcgccgaaggcatcatcgacccggcgaaggtgacccgttccgcg
ctgcagaacgccgcctccatcgccgcgctgttcctcaccaccgaggccgtcatcgccgac
aagccggagaaggccgccgcggccgccccgggcggcatgccgggcggtgacatggacttc
tga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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