KEGG T02787: B446

Streptomyces collinus: B446_19190

Entry

B446_19190        CDS       T02787

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

sci Streptomyces collinus

Brite

KEGG Orthology (KO) [BR:sci00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sci03032]
    B446_19190 (gyrB)
   03400 DNA repair and recombination proteins [BR:sci03400]
    B446_19190 (gyrB)
Enzymes [BR:sci01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     B446_19190 (gyrB)
DNA replication proteins [BR:sci03032]
Prokaryotic type
  DNA Topoisomerases
   B446_19190 (gyrB)
DNA repair and recombination proteins [BR:sci03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      B446_19190 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c

Other DBs

NCBI-ProteinID:

AGS70652

UniProt:

S5VJA6

Position

4414453..4416510

AA seq 685 aa
MADSGNPNENIPSTDAGVNGAAEDSGPVAASYDASAITVLEGLDAVRKRPGMYIGSTGER
GLHHLVYEVVDNSVDEALAGYADTIDVTILADGGVRVVDNGRGIPVGIVPSEGKPAVEVV
LTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSSKVSVEVRTDGHRWTQDYKMGVPTAPL
AKHEAIEQTGTSVTFWADPEIFETTEYSFETLSRRFQEMAFLNKGLTIRLTDERESAKAT
AGADEAGADEKDEVKTVTYHYEGGIVDFVKYLNSRKGDVVHPTVIDLEAEDRDKSLSLEV
AMQWNSGYSEGVYSFANIIHTHEGGTHEEGFRAALTSLINKYARDKKLLREKDDNLTGDD
IREGLTAIISVKLSEPQFEGQTKTKLGNTEAKTFVQKAVYEHLNDWLDRNPVEAADIIRK
GIQAATARVAARKARDLTRRKGLLESASLPGKLSDCQSNDPTKCEIFIVEGDSAGGSAKS
GRNPQYQAILPIRGKILNVEKARIDKILQNQEIQALISAFGTGVHEDFDIEKLRYHKIIL
MADADVDGQHISTLLLTFLFRFMRPLVEAGHVYLSRPPLYKIKWGRDDVEYAYSDRERDA
LIEMGRQRGKRVREDSIQRFKGLGEMNAEELRVTTMDQEHRVLGQVTLDDAAQADDLFSV
LMGEDVEARRAFIQRNAKDVRFLDI

NT seq 2058 nt +upstreamnt +downstreamnt
gtggccgattccggcaaccccaacgagaacatcccgtccaccgacgccggcgtgaacggc
gcggccgaagactccggcccggtcgccgcttcttacgacgccagcgccatcaccgtgctc
gaagggctggacgcggtccgcaagcgacccggtatgtacatcggctccaccggtgaacgc
ggcctgcaccacctggtgtacgaggtcgtcgacaactcggtcgacgaggcgctggccggc
tacgcggacaccatcgacgtgacgatcctcgccgacggcggcgtgcgcgtcgtcgacaac
ggccgcggcatcccggtgggcatcgtgccctccgagggcaagccggccgtcgaggtcgtg
ctgaccgtgctgcacgcgggcggcaagttcggcggcggcggttacgcggtctccggcggt
ctgcacggcgtgggcgtgtccgtcgtgaacgccctgtcgtccaaggtctccgtcgaggtc
aggaccgacgggcaccgctggacccaggactacaagatgggcgtccccactgcgccgctg
gccaagcacgaggccatcgagcagacgggcacgtcggtcaccttctgggccgacccggag
atcttcgagaccaccgagtactccttcgagacgctgtcgcggcgcttccaggagatggcg
ttcctcaacaagggcctcacgatcaggctcaccgacgagcgcgagtcggcgaaggccacc
gccggggcggacgaggcgggtgcggacgagaaggacgaggtcaagaccgtcacgtaccac
tacgagggcggcatcgtcgacttcgtgaagtacctcaactcccgcaagggggacgtggtc
caccccaccgtcatcgacctggaggcggaggacagggacaagagcctgtccctcgaggtc
gcgatgcagtggaacagcggctacagcgagggcgtctactcgttcgcgaacatcatccac
acccacgagggcggtacccacgaagagggtttccgcgccgcgctgacgtcgctgatcaac
aagtacgcccgcgacaagaagctgctgcgcgagaaggacgacaatctcaccggtgacgac
atccgcgagggcctgaccgcgatcatctcggtcaagctgagcgagccgcagttcgagggc
cagacgaagaccaagctgggcaacacggaggccaagaccttcgtgcagaaggcggtctac
gagcacctcaacgactggctggaccgcaacccggtcgaggcggcggacatcatccgcaag
ggcatccaggcggccaccgcgcgcgtggcggcccgcaaggcccgcgacctgacccgccgc
aagggcctgctggagtcggcgtccctgccgggcaagctgtccgactgccagtcgaacgac
ccgaccaagtgcgagatcttcatcgtcgagggtgactccgccggcggctcggccaagtcc
ggccgcaacccgcagtaccaggcgatcctcccgatccgcggcaagatcctcaacgtcgag
aaggccaggatcgacaagatcctgcagaaccaggagatccaggcgctgatctccgcgttc
ggcaccggcgtgcacgaggacttcgacatcgagaagctccgctatcacaagatcatcctg
atggcggacgccgacgtcgacggacagcacatcagcaccctgctgctgaccttcctgttc
cgcttcatgcggccgctggtcgaggccgggcacgtgtacctctcccgtcccccgctgtac
aagatcaagtggggccgcgacgacgtcgagtacgcgtactcggaccgcgagcgcgacgcg
ctgatcgagatgggccggcagcgcggcaagcgcgtccgcgaggactcgatccagcgcttc
aagggcctcggcgagatgaacgccgaggagctgcgcgtcaccacgatggaccaggagcac
cgcgtcctcggccaggtcaccctggacgacgccgcccaggccgacgacctgttctcggtc
ctcatgggcgaggacgtcgaggcccgccgcgcgttcatccagcgcaacgccaaggacgtc
cgcttcctcgacatctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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