KEGG T00634: sce5931

Sorangium cellulosum So ce56: sce5931

Entry

sce5931 CDS T00634

Gene name

rluD3

Definition

(GenBank) ribosomal large subunit pseudouridine synthase D

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

scl Sorangium cellulosum So ce56

Brite

KEGG Orthology (KO) [BR:scl00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:scl03009]
    sce5931 (rluD3)
Enzymes [BR:scl01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     sce5931 (rluD3)
Ribosome biogenesis [BR:scl03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    sce5931 (rluD3)

SSDB

Motif

Pfam:

PseudoU_synth_2 S4 CT_C_D

Other DBs

NCBI-ProteinID:

CAN96095

UniProt:

A9GBV3

Position

8329156..8330193

AA seq 345 aa
MAAGAGALHFRFRVDDGDPRDRLDKLVVHLLERAGHAASRAAVQRWIAAGRVLVDGEPAR
ASVAVRASALVEVRPEEPSPSPTAAEPDVVIPVVYEDEHLLVIDKPAGLVVHPARGHASG
TLVNGLLALPGFALAPADPRDPMGHVRPGIVHRLDRGTSGLLVVAKDEPTREALKDRFAR
HAIEREYAAIVAGEARDATYDTLHGRHPTDRLRFTSWIRGGAGAPGSHVAAPRRAVTHVR
VIERLGDAATVVACSLETGRTHQIRVHLAERGRTPVLGDPLYGKPPKKPAVRAIAEELGR
QALHARVLGFIHPATQKPVRWESALPADMRKALDQLRALATRSSI

NT seq 1038 nt +upstreamnt +downstreamnt
atggctgccggtgcaggagcgctccacttccgtttccgggtggacgacggcgaccctcgt
gaccggctcgacaagctcgtcgtccacctgctcgagcgcgccggccatgcggcctcccgc
gcggcggtgcagcggtggatcgccgccggtcgggtcctcgtcgacggggagcccgcgcgc
gcgtcggtggcggtgcgcgcaagcgcgctggtcgaggtccgccccgaagagccgtcgccc
tcgcccaccgcggccgagcccgacgtggtcatcccggtggtgtacgaggatgagcacctg
ctcgtcatcgacaaacctgccgggctcgtcgtgcatccggcccgcggccacgcgtccggc
acgctggtcaacgggctgctcgccctgcccgggttcgccctggcgcccgccgatccgcgc
gatcccatgggccatgtccgcccggggatcgtgcacaggctcgaccgagggacgagcggc
ctgctcgtcgtggcgaaggacgagcccacccgcgaggcgctgaaagatcggttcgccagg
cacgcgatcgagcgcgagtacgccgcgatcgtcgccggcgaggcgcgagacgccacctac
gacacgctccacggccggcacccgaccgacaggctccggttcacgtcgtggatccgcggc
ggcgccggcgcgcccggatcacacgtcgccgcgccgcgccgcgccgtgacgcacgtccgc
gtgatcgagcggctcggcgacgcggcgaccgtcgtcgcgtgctcgctcgagacgggccgc
acccaccagatccgggtgcacctcgccgagcgcggcaggacacccgtcctcggagacccc
ctctacggcaagccgccgaagaagccggcggtacgggcgatcgcggaggagctgggccgg
caagccctccacgcgcgcgtgctcgggttcatccaccccgccacgcaaaagcccgtccgc
tgggagagcgcgctgccagcggacatgcgcaaggcgctcgaccagctgcgggcgctcgct
accagatcttcgatttga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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