KEGG   Sorangium cellulosum So ce56: sce8640
Entry
sce8640           CDS       T00634                                 
Name
(GenBank) ECF-family RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
scl  Sorangium cellulosum So ce56
Brite
KEGG Orthology (KO) [BR:scl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scl03021]
    sce8640
Transcription machinery [BR:scl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     sce8640
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 FAM180
Other DBs
NCBI-ProteinID: CAN98810
UniProt: A9G009
Position
12049929..12050603
AA seq 224 aa
MGANDREDVLHDVLLAAYRNLETFDASRLLRALQGRRDEDDFFEDDFEDEDHEPVPLSAV
LPWIGEGQPRRVWDSLYRWLYGIAWRQVSHYRDRAYRRREIPDGLRLTAISAGADSRPRL
EQRLEAMERAEVIDALLASLDPQRRVMLVMHDMLDIPVVDIARELQINENTGQNRLRLAR
EDFRAAVKRLDPEQRSALRLGDRPFAAESTTRRRPAPQRRRRGK
NT seq 675 nt   +upstreamnt  +downstreamnt
gtgggggcgaacgatcgcgaggacgtgctgcacgacgtcctcctcgccgcttatcgcaat
ctggagaccttcgacgcgagccgcctgctgcgcgcgttgcaggggcggcgcgacgaggac
gacttcttcgaggacgacttcgaggacgaggaccacgagccggtgccgctcagcgcggtg
ctcccgtggatcggggaggggcagccgcggcgggtgtgggactcgctctaccggtggctc
tacgggatcgcgtggcggcaggtcagccactaccgcgaccgggcctatcggcgccgcgag
atcccggacggcctgcggctcaccgcgatctccgccggcgccgacagccggccccgcctg
gagcagcggctggaggcgatggagcgggcggaggtgatcgacgcgctgctcgccagcctc
gacccgcagcggcgggtcatgctggtgatgcacgacatgctggacatcccggtcgtggac
atcgcccgggagctccagatcaacgagaacacggggcagaaccggctacggctggcccgc
gaggacttccgggcggcggtgaagcggctcgacccggagcagcggagcgcgctgcgcctc
ggcgacaggccgttcgccgcggagtcgacgacgcgccgccggccggccccccagcggcgc
aggcgggggaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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