KEGG   Streptomyces clavuligerus: BB341_10180
Entry
BB341_10180       CDS       T04717                                 
Name
(GenBank) RNA polymerase sigma factor ShbA
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
sclf  Streptomyces clavuligerus
Brite
KEGG Orthology (KO) [BR:sclf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sclf03021]
    BB341_10180
Transcription machinery [BR:sclf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BB341_10180
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r4_2 Sigma70_r2 Sigma70_ECF HTH_16 HD_5 HTH_23 GerE
Other DBs
NCBI-ProteinID: ANW18572
Position
complement(2597598..2598173)
AA seq 191 aa
MRDDNTTVIGALVHRAVEGDEQATHDLLAHVHPLALRYCRTRLNRLPGDARHFVEDLAQE
VCVAVLMALPRYRDTGRPFEAFVFAIATHKVADLQRAAMRHPGSTAVPSDEMPERPDDSL
GPEERALLSDDAEWARKLLANLPENQRELLVLRVAVGLTAEETGQMLGMSPGAVRVAQHR
ALSRLRALAEQ
NT seq 576 nt   +upstreamnt  +downstreamnt
atgcgtgacgacaacaccacggtgatcggtgcactcgttcaccgtgccgtcgagggagac
gagcaagccacgcacgacctcctcgcgcatgtccacccgctcgcgctgcgctactgccgc
acccggctcaaccggctgcccggtgacgcgcgccacttcgtggaggatctggcccaggag
gtctgtgtcgccgtcctgatggccctgccccgctaccgggacaccggcaggcccttcgag
gcgttcgtcttcgcgatcgccacgcacaaggtcgccgatctccagcgggccgccatgcgc
caccccggatcgacggccgtcccctccgacgagatgcccgagcggcccgacgactccctc
ggcccggaggagcgcgccctgctcagcgacgacgccgagtgggcccgcaagctgctggcc
aatctgccggagaaccagcgcgagctgctggtgctgcgggtcgcggtcgggctgacggcg
gaggagaccggacagatgctgggcatgtccccgggcgcggtccgggtcgcccagcaccgc
gccctgagcaggctgcgcgcgctcgccgagcagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system