KEGG   Sphingobium cloacae: SCLO_1002610
Entry
SCLO_1002610      CDS       T05301                                 
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
sclo  Sphingobium cloacae
Pathway
sclo02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sclo00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SCLO_1002610
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sclo02044]
    SCLO_1002610
Enzymes [BR:sclo01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     SCLO_1002610
Secretion system [BR:sclo02044]
 Type IV secretion system
  Trb secretion system protein
   SCLO_1002610
SSDB
Motif
Pfam: T2SSE Zeta_toxin FtsK_SpoIIIE AAA_16 TrwB_AAD_bind AAA_19 ABC_tran RsgA_GTPase AAA_29 AAA_22 nSTAND3 DUF87 AAA_30 cobW DEAD TsaE DUF815 SLFN-g3_helicase MMR_HSR1 CbiA AAA_7 Sigma54_activat AAA_28 Septin ResIII NACHT GTP_EFTU AAA_23 ABC_ATPase MobB IstB_IS21 Mg_chelatase AAA_11 AAA_10 ATP_bind_1 ATPase P-loop_TraG UvrD-helicase
Other DBs
NCBI-ProteinID: BAV63301
UniProt: A0A1E1EYJ0
Position
SCLO_1:289835..290821
AA seq 328 aa
MSIQPIRSEGFTRGARMLRTALGPSIASWLEDSAVIEVMLNPDGRLWIDRLGEGISDTGM
TMGAADGERIVRLVAHHVGAEVHARSPRVSAELPEGGERFEGLLPPIVAAPAFAIRKPAV
AIFTLDDYAAAGIMSPAEAGALREAVASRANILVAGGTGAGKTTLVNALLAEIARTPDRI
VLIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLIKAW
GTGHPGGVGTIHAGTALGALRRMEQLIQEAVVTVPRALLAETIDLIAVLVRDGHGRRLSE
LARVAGLDPATGDYRLAPLSTTPPGDLS
NT seq 987 nt   +upstreamnt  +downstreamnt
ttgtccatccagccgatccgatccgaaggtttcacgcgcggcgcgcggatgctgcgcacg
gcgctggggccgtcgatcgcatcctggctcgaagactccgccgtcatcgaggtgatgctg
aaccctgacggccggctctggatcgatcggctcggcgaggggatttccgacaccggcatg
acgatgggcgcggcggacggtgagcgcatcgttcgcctggtcgcccaccatgtcggcgcc
gaggttcacgcgcgtagcccccgcgtctcggccgagctgcccgagggcggcgagaggttc
gaggggttgctgccgccgatcgtcgcggcgccggctttcgctatccgcaagcccgccgtc
gcgatcttcacgctcgatgactatgcggcggccgggatcatgtcgccggccgaggccggc
gcgctgcgtgaggccgtggcgtcgcgcgccaacatccttgtcgcgggaggcaccggcgcc
ggcaaaacgacgctggtcaatgcgctcctggcggagatcgctcgcacgccagaccggatc
gtgctgatcgaggatacgcgcgagctgcaatgcgccgcgcccaacctggtcgccatgcgc
acgaaggatggcgtcgcctcgctgtccgatcttgtccgatcctcgctgcgcctccgtccc
gaccgcatccccatcggcgaggtgcgcggggccgaggcgctggacctcatcaaagcctgg
gggacgggacaccccggcggtgtcggcaccatccacgcaggaacggcgctcggcgcgctg
cgccgcatggagcagctcatccaggaggccgtcgtcacggtcccccgcgcgctgttggcc
gagaccatcgacctgatcgccgtgctggtccgcgacggacacggccgccggctttccgag
ctggcccgcgtcgccgggctcgatcccgcgaccggcgactaccgcctcgcgccgctttcc
accaccccaccgggagacttgtcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (38)   
   Pfam (38)   
All databases (48)   

Download RDF
DBGET integrated database retrieval system