KEGG   Sphingobium cloacae: SCLO_1017020
Entry
SCLO_1017020      CDS       T05301                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
sclo  Sphingobium cloacae
Brite
KEGG Orthology (KO) [BR:sclo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sclo03032]
    SCLO_1017020
   03400 DNA repair and recombination proteins [BR:sclo03400]
    SCLO_1017020
Enzymes [BR:sclo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     SCLO_1017020
DNA replication proteins [BR:sclo03032]
 Prokaryotic type
  DNA Topoisomerases
   SCLO_1017020
DNA repair and recombination proteins [BR:sclo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SCLO_1017020
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: BAV64742
UniProt: A0A1E1F2R3
Position
SCLO_1:1950300..1951310
AA seq 336 aa
MPGQAIIHSDDSQPGITRRRLKRGWAYYDADGIRIADRDEIDRLNAIAMPPAYADCWFCP
SPNGHIQATGQDARGRKQYRYHPDFRAEREAEKYAGCLAFGLALPRLRARLDADLSGRGL
RKERTIAAVVRLLDLAKLRIGNEHYATTNKSFGATTLRRRHVDMAGHSLRLRYRSKSGLL
REMTVTDRRLARFVRKLHDLPGQHLFQYVDEAGEARPITSSDVNAYIAETMGGAFTAKHF
RTWGASTIAFAALCEGPVSLKQMIAPVAEALGNTPAISRKSYIHPALVDLCRNGQETWRE
GLRLPRRTRYLSRHERGLIALLDMRTEEEEKLPAAA
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgcccggacaagccatcatccattccgacgacagccagccgggcatcacgcgacgcagg
ctcaagcggggctgggcctattatgatgcggacgggatccgcatcgccgaccgggacgag
atcgaccggctgaacgccatcgccatgccgccagcctatgccgattgctggttctgcccc
tcgcccaacggccatatccaggcgaccggacaggatgcccgcggccgcaagcaatatcgc
tatcatcccgatttccgggcggagcgcgaagcggagaaatatgccggatgccttgccttc
ggcctggccctgccccgattgcgcgcccggctggacgccgatctttccggccggggactg
cgcaaggaaaggaccatcgcggcggtcgtgcgcctgctcgacctcgccaagctgcgcatc
ggaaacgagcattacgccaccaccaacaagagcttcggcgcgaccaccctgcgccggcgc
catgtggacatggcgggccattcgctgcggctgcgctaccgctccaaatcgggcctgctc
cgggagatgacggtcacggaccggaggctggcacgcttcgtgcgcaagctgcacgacctg
ccgggccagcatctgttccaatatgtcgatgaagcgggcgaggcccggccgatcacctcc
agcgacgtcaacgcctatatcgccgaaacgatgggcggcgccttcaccgccaagcatttc
cgcacatggggcgcctccaccatcgccttcgccgcgctgtgcgaagggccggtgtcgctc
aagcagatgatcgcgccggtcgccgaagcgctgggcaatacgcccgccatcagccggaaa
agctatatccatccggcactggtcgatctgtgcagaaatgggcaggaaacgtggcgagag
gggcttcgcttgccgcgccggacacgctatctctcccggcatgagcgcggactgatcgcg
ctgttggatatgcggacggaggaggaggagaagctgcctgcggccgcttga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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