KEGG   Sphingobium cloacae: SCLO_1026800
Entry
SCLO_1026800      CDS       T05301                                 
Name
(GenBank) exodeoxyribonuclease 7 large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
sclo  Sphingobium cloacae
Pathway
sclo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sclo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    SCLO_1026800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sclo03400]
    SCLO_1026800
Enzymes [BR:sclo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     SCLO_1026800
DNA repair and recombination proteins [BR:sclo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     SCLO_1026800
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon RecJ_OB
Other DBs
NCBI-ProteinID: BAV65720
UniProt: A0A1E1F5C4
Position
SCLO_1:3094099..3095592
AA seq 497 aa
MSPDYDAYDNSGRLLAEERAGDNAPPLTVSELSGLLKRTVEDRFGHVRLRGEISGFKRAA
SGHLYLCLKDDNAVIDGVMWKGSAARIAFAAQDGVEVIATGKLTTYPGRSKYQIVIDRME
LAGEGALMALLEKLKAKLAAEGLFDRDRKRPLPFMPRTIGVVTSPTGAVIRDILHRLSDR
CPTDVLLWPVLVQGDGAAAQVARAVRGFSAMPADGPLPRPDLVIVARGGGSIEDLWSFNE
EIVVRAVAECSIPVISAVGHETDTTLCDYAADMRAPTPTAAAEMAVPVRAELLAMLREQG
VRMDRAVRRGAAQARERLEMQARLMPTPDTLLAPQRQRLDQLSDALASGLRHRLADARTH
LSQAGGALRPALLQQYVSRARERVDRLRLRPDYLTRALADRATAFDRLSRLFVSLDPDRP
LQRGFARVMAGGHLVRDTAAARAAGQVTLHFRDGEVDATVEGAPPLEKPAPPAISNPSRP
AHKKREEGEIRQQDLFS
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgtccccggattacgatgcctatgacaattcgggccgcctgttagccgaggaacgcgcc
ggggacaacgcgccgccgctcaccgtcagcgaattgtcgggcctgctcaagcgcacggtg
gaggaccgtttcggccatgtccgcctgcgcggtgagatttccggtttcaagcgcgcggcg
tccggccatctctatctctgcctgaaagacgacaatgccgtcatcgacggggtgatgtgg
aagggcagcgccgcccgcatcgccttcgccgcgcaggacggggtggaggtgatcgcgacg
ggcaagctcaccacctatcccggccgctccaaatatcagatcgtgatcgaccggatggaa
ctggccggggaaggcgcactcatggccctcctcgaaaagctgaaggcgaaactggcggca
gagggcctgttcgaccgagaccgcaagcgcccgctgcccttcatgccccgcaccatcggc
gtggtcacgtcccccaccggcgcggtgatccgcgacatcctccaccgcctgtcggaccgc
tgcccgaccgacgttctgctctggccggtgctggtgcagggggatggcgcggcggcgcag
gtcgcccgcgccgtgcgcggcttttccgccatgcccgctgatggtccgttgccccggccc
gatctcgtcatcgtcgcgcgcggcggcggctccatcgaggatttgtggagcttcaacgag
gagatcgtcgtccgcgccgtggcggaatgctccatccccgtcatttcggcggtcggccac
gaaaccgatacgacgctctgcgactacgccgccgacatgcgcgcgcccacgcccaccgcc
gccgccgaaatggccgtgccggtccgcgccgaactgctggcgatgctgcgcgagcagggc
gtccgcatggaccgcgccgtccggcgcggcgcggcgcaggcccgcgagcggctggaaatg
caggcgcgcctgatgcccacgcccgacacgctgctcgccccccagcgccagcggctcgac
cagctgtccgacgcgctcgccagcggcctgcgccaccgcctcgccgacgcccgcacgcat
ctgagccaggcgggcggcgcgctccgccccgcgcttctccagcaatatgtcagccgcgcc
agggagcgcgtggaccgcctgcgcctgcgccccgattatctgacccgcgccctggcggac
cgcgccaccgccttcgaccgcctttcccgcctgttcgtctcgctcgatcccgaccgcccg
ctccagcgcggtttcgcccgcgtcatggcgggcggccacctcgtccgcgacaccgccgcc
gcccgcgccgccggtcaggtcacgctccacttccgcgacggagaggtggacgccaccgtc
gaaggcgccccgccccttgagaagcccgctccaccggctatatcgaatccatcccgcccc
gcgcacaaaaagcgcgaagagggcgaaatccggcagcaggacctcttctcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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