KEGG   Sphingobium cloacae: SCLO_3001120
Entry
SCLO_3001120      CDS       T05301                                 
Name
(GenBank) molecular chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
sclo  Sphingobium cloacae
Pathway
sclo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sclo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SCLO_3001120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sclo03019]
    SCLO_3001120
   03110 Chaperones and folding catalysts [BR:sclo03110]
    SCLO_3001120
   03029 Mitochondrial biogenesis [BR:sclo03029]
    SCLO_3001120
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sclo04147]
    SCLO_3001120
Enzymes [BR:sclo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     SCLO_3001120
Messenger RNA biogenesis [BR:sclo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SCLO_3001120
Chaperones and folding catalysts [BR:sclo03110]
 Heat shock proteins
  HSP60 / Chaperonin
   SCLO_3001120
Mitochondrial biogenesis [BR:sclo03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    SCLO_3001120
Exosome [BR:sclo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SCLO_3001120
  Exosomal proteins of other body fluids (saliva and urine)
   SCLO_3001120
  Exosomal proteins of breast cancer cells
   SCLO_3001120
  Exosomal proteins of colorectal cancer cells
   SCLO_3001120
  Exosomal proteins of bladder cancer cells
   SCLO_3001120
SSDB
Motif
Pfam: Cpn60_TCP1 Pho88
Other DBs
NCBI-ProteinID: BAV66779
UniProt: A0A1E1F8E6
Position
pSCLO_3:complement(120308..121927)
AA seq 539 aa
MAAKEVKFASDARDRMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELKDKFENMGAQMLREVASKQNDKAGDGTTTATVLAQSIVREGSKAVAAGMNPMDLKRGI
DLAVGAVVQDLAAHAKKVSANSEIAQVATISANGDAEVGRILAEAMEKVGNEGVITVEEA
KSLATELETVEGMQFDRGYLSPYFVTNAEKLKVELEDPYILIHEKKLSNLQALIPLLEQV
VQSGRPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTAGNV
VSEELGTKLENVTLGMLGRAKKIIIDKDNTTVVDGAGARSDIDARVAQIRAQIETTTSDY
DREKLQERVAKLAGGVAVIRVGGATEVEVKEKKDRVDDALHATRAAVEEGILPGGGIALL
RALKALDGLKAANDDQQSGIDIVRRALRSPARQIADNAGEDGAFIVGKLLESSDYNWGFN
AATGEYEDLVKSGVIDPAKVVRTALQDAASVASLLITTEALVAELPKEDKAAPMPAMDY
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggctgccaaggaagtgaaatttgcgtcggacgcgcgtgatcgcatgctgcgcggcgtg
gatacgcttgcgaatgcagtaaaggtcacgctcggtcccaagggccgcaatgtcgtgatc
gagaagagcttcggcgctccgcgcattaccaaggacggcgtcaccgtcgccaaggagatc
gagctcaaggacaagttcgagaacatgggcgcgcagatgctgcgcgaagtggcctcgaag
cagaacgacaaggcgggtgacggaaccaccacggccactgtgctcgcccagtcgatcgtg
cgcgagggctcgaaggcggtggccgccggcatgaacccgatggacctgaagcgcggcatc
gatctggcggtcggcgccgtggtccaggatctcgctgcgcatgccaagaaggtcagcgcc
aacagcgagatcgcccaggtcgccaccatatcggccaatggcgatgctgaagtcggccgc
attctcgctgaagccatggagaaggtcggcaatgagggcgtcatcacagtcgaggaggcg
aagagcctcgcgaccgagctcgaaacggtcgagggcatgcagttcgatcgcggctatctc
tcgccctatttcgtgaccaacgccgagaagctcaaggtcgagctcgaggacccctatatt
ctcatccacgagaagaagctgtccaacctgcaggccctcattccgctgctggagcaggtg
gttcagtcgggccggccgcttctcattatcgccgaggacgtcgaaggcgaggcgctggcc
acgctcgtcgtcaacaagctccgcggtgggctcaaggtcgcggccgtcaaggcgcctggc
ttcggcgatcgccgcaaagcgatgctcgaggatatcgcaatcctcaccgccggcaatgtg
gtcagcgaggaactcggcacgaagctggaaaacgtaacgctggggatgctcggccgcgcc
aagaagatcatcatcgacaaggacaacaccaccgtcgtcgatggcgcaggcgcacgctcg
gacatcgatgcccgggtcgcgcagatccgtgctcagatcgagaccacgaccagcgactat
gaccgcgaaaagctgcaggagcgcgtagccaagctagcaggcggcgtcgcggtcattcgc
gtcggcggtgcgaccgaagtcgaggtcaaggaaaagaaggatcgtgtcgatgacgcgctc
cacgccactcgcgccgcggtcgaggaaggcatcctgccgggcggcggcatcgctctgctc
cgcgcgctgaaggcactcgacggtctcaaggcggccaacgacgaccagcagtccggcatc
gacatcgtcaggcgggctctgcgctcgccggcgcggcagatcgccgacaatgcgggcgag
gacggcgccttcatcgtgggcaagcttctggaaagcagcgactacaactggggcttcaac
gccgccaccggcgaatatgaagacctggtgaagtcgggcgtcatcgatccggccaaggtc
gtgcgtaccgccctccaggacgccgcctcggtcgcctcgctgctcatcactaccgaggcg
ctcgtggccgagcttccaaaggaagataaggccgcgccgatgccggcgatggattactga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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