KEGG   Solitalea canadensis: Solca_1068
Entry
Solca_1068        CDS       T02084                                 
Name
(GenBank) DNA/RNA helicase, superfamily II
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
scn  Solitalea canadensis
Pathway
scn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:scn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Solca_1068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scn03019]
    Solca_1068
Enzymes [BR:scn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Solca_1068
Messenger RNA biogenesis [BR:scn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Solca_1068
SSDB
Motif
Pfam: DEAD Helicase_C
Other DBs
NCBI-ProteinID: AFD06175
UniProt: H8KVB7
Position
1268915..1270204
AA seq 429 aa
MSLDKLKLNKQLVTAMTEAGFLAPKEMQLKVVSRIIGGQDVIAIGPEGSGKTTTYILGIL
MRLKYAHEEAPRALVLVPDADRIEAVTDQFALLNKSSLRVVGFSPLAGIQSQMDVLADGC
DIVVTTPDRARALYMKLGLNLNLIQTFILDDADLMIKNGYQLPVSELARSIVKCQHLIFT
EVLHGKLEQLIEPFMNLPATIEITELKEPDVAIIPQILYKVLNFKTKLNLLNLLMRDDDY
FNKVIVFVNTRLTAQKLFKSLDKRLHDQVALYKPMFFDQPGLKSVDEFRESDARIFIIAN
EDVEKVDLSEIPFILNFDQPEEKEVYISRIIKNEGNAETLAIAFATDIELSLITKIEQAT
GQLMEEVELPLGLIIENNPDKEKVAQKKAKKEKAVDEQRGAAFHEKKAENAKTYNYSSKE
KAKMKYKKK
NT seq 1290 nt   +upstreamnt  +downstreamnt
gtgtcattagataaattaaaattaaacaaacaactggtaaccgcgatgaccgaagcggga
tttttggcgccaaaagaaatgcagctgaaggttgtatcacgtattattggcggacaagat
gttattgcaatcggtccagaaggaagcggcaaaaccacaacctatattcttggtatttta
atgcgtcttaaatatgcgcatgaagaagctccacgtgcattagttcttgttccggatgcc
gaccgaattgaagccgtaaccgatcagtttgccttgcttaataaaagtagtttacgtgta
gtcggcttttcacctttagcaggtattcaatcgcaaatggatgtacttgcagacggctgc
gatattgtagtaaccacgcccgatcgtgcccgcgccctgtacatgaaattagggctgaat
cttaacctgattcagacgtttattcttgatgatgccgatctaatgatcaagaatggatat
caattgcctgtaagcgaattagcaagaagtattgttaaatgccagcatttaatatttacc
gaagtgttacatggtaaattggaacagctgatagagccgttcatgaatttacctgctaca
atagagattacagagctaaaggaaccggatgttgccattattccgcagattttgtacaaa
gtattaaactttaaaacaaagctcaatttgttaaatctattgatgcgggatgatgattat
tttaacaaggttattgtatttgtaaatacccgtttaacagcacaaaaattatttaaaagt
cttgataaacgtttgcatgaccaggtagcgctatataaacctatgttctttgatcagcca
ggactaaagtctgtggacgaattcagggaaagtgatgcccgaatcttcatcattgctaat
gaagatgtagaaaaagtagatttgagtgaaattccgtttatcctgaattttgatcaaccg
gaagaaaaagaagtttatatttcccgtataataaaaaatgaaggaaatgcagaaacactg
gccatcgctttcgctactgacattgaattaagtttgattacaaagattgaacaagcaacc
ggacaattaatggaagaggtagagcttccgcttggtctgattattgaaaacaaccctgat
aaggaaaaggtggctcagaaaaaagctaaaaaggaaaaagccgttgacgagcaaagaggg
gcagcgtttcacgagaaaaaagcagaaaacgctaaaacttataattatagctcaaaagaa
aaagcaaaaatgaagtataagaagaagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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