KEGG   Streptomyces coelicolor: SCO2821
Entry
SCO2821           CDS       T00085                                 
Symbol
SCBAC17F8.12c
Name
(RefSeq) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
sco  Streptomyces coelicolor
Pathway
sco00040  Pentose and glucuronate interconversions
sco01100  Metabolic pathways
sco02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sco00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    SCO2821 (SCBAC17F8.12c)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SCO2821 (SCBAC17F8.12c)
Enzymes [BR:sco01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     SCO2821 (SCBAC17F8.12c)
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix F5_F8_type_C
Other DBs
NCBI-GeneID: 1098255
Kitasato: SCO2821
Position
complement(3080444..3082009)
AA seq 521 aa
MRRPVALRLQAALGTLALAAAAGVVLTMPEAAAAAGGATGYATQNGGTTGGAGGQTVRAT
TGTAIHEALCGRADSSTPITIEVEGTINHGNTSKVSGDSCNTAADRIELKQVSNITIVGV
GNGAVFDQLGIHIRESSNIIIQNVTVRNVKKSGSPTSNGGDAIGMESDVRNVWVDHSTLE
ASGGESEGYDGLFDMKDNTQYVTLSYSVLRNSGRGGLIGSSESDTSNGYVTFHHNLYENI
DSRAPLLRGGTAHMYNNHYVSLNKSGINSRAGAKAKVDNNYFEDSKDVLGTFYTDAAGFW
QVSGNIFDNVTWSEPGGDNNPAGPDPQSNTTVSIPYSYGLDDASCVPSVVSGTAGANKGL
KVSDGSCTPQSPDPTDPTDPDPTDPDPTDPTDPDPTDPPSGTNLSVGAGSDGSSKASGTS
YGNVRDGDLGTYWSPAGTTGSISVKWSSATTVGKINIREAAGSEGTVGSYRVVNHDTGAV
LASGSGAGVIGFSPVSLEKITFEITGASGTPKIAEFETYAG
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgagacgaccagtcgcgctgcgactccaagcggcactgggcacactggccctcgcggcc
gcggccggtgtggtgctgacgatgcccgaggcggcggcagcggccggcggcgccaccggc
tacgcgacccagaacggcggcacgaccggcggcgcgggcgggcagaccgtccgggccacc
accggcaccgcgatccacgaggccctgtgcggccgggccgacagcagcaccccgatcacc
atcgaggtcgagggcaccatcaaccacggcaacaccagcaaggtgtcgggcgacagctgc
aacaccgcggccgacaggatcgagctgaagcaggtcagcaacatcacgatcgtcggggtc
gggaacggcgccgtcttcgaccagctgggcatccacatccgggagtccagcaacatcatc
atccagaacgtgaccgtccggaacgtcaagaagtccggctcgcccacgtccaacggcggc
gacgccatcggcatggagagcgacgtccgcaacgtctgggtcgaccactccaccctggag
gcctccggcggggagtcggagggctacgacggcctcttcgacatgaaggacaacacccag
tacgtcaccctgtcctacagcgtcctgcgcaactccggccggggcgggctgatcgggtcc
agcgagagcgacacctcgaacgggtacgtcaccttccaccacaacctgtacgagaacatc
gactcccgcgcacccctgctgcgcggcggcacggcccacatgtacaacaaccactacgtg
agcctgaacaagtcgggcatcaactcccgcgccggcgccaaggccaaggtcgacaacaac
tacttcgaggactccaaggacgtcctcggcaccttctacaccgacgcggccggcttctgg
caggtcagcggcaacatcttcgacaacgtgacctggtccgagcccggcggggacaacaac
ccggccggccccgacccgcagtccaacaccacggtgtccatcccgtactcctacggcctc
gacgacgcctcctgcgtgccgtccgtggtgagcggcacggcgggcgcgaacaagggcctg
aaggtctcggacggcagctgcaccccgcagagcccggacccgaccgaccccaccgacccg
gacccgaccgacccggacccgacggatccgaccgacccggacccgaccgacccgccgagc
gggaccaacctgagcgtcggggcgggctccgacggctcgtccaaggcgagcggcaccagc
tacggcaacgtgcgcgacggcgacctcggcacgtactggtccccggccggcacgaccggc
tccatctccgtgaagtggtcctccgccaccaccgtcggcaagatcaacatccgtgaggcg
gcgggctccgagggcaccgtcggctcctaccgcgtcgtcaaccacgacaccggcgccgtc
ctggcctccggcagcggggcgggcgtgatcggcttctccccggtctcgctggagaagatc
accttcgagatcaccggcgcctccggcaccccgaagatcgccgagttcgagacgtacgcg
ggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-Gene (1)   
   KITASATO (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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