KEGG   Streptomyces coelicolor: SCO5822
Entry
SCO5822           CDS       T00085                                 
Name
(RefSeq) DNA topoisomerase IV subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
sco  Streptomyces coelicolor
Brite
KEGG Orthology (KO) [BR:sco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sco03032]
    SCO5822
   03400 DNA repair and recombination proteins [BR:sco03400]
    SCO5822
Enzymes [BR:sco01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SCO5822
DNA replication proteins [BR:sco03032]
 Prokaryotic type
  DNA Topoisomerases
   SCO5822
DNA repair and recombination proteins [BR:sco03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SCO5822
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c
Other DBs
NCBI-GeneID: 1101264
Kitasato: SCO5822
Position
6371006..6373129
AA seq 707 aa
MTAETSVPSTALLAGADRDGSNYTARHLLVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEI
IDNSVDEALGGYCDHIEVILHDDASVEVRDNGRGIPVDVEPKTGLSGVEVVMTKLHAGGK
FGGGAYAASGGLHGVGASVVNALSARLDIEVDLGGHTHAISFRRGVPGTFAKAGPDAKFE
AGSGLRKVKKVPKSRRGTRVRYWADRQIFLKDAKLSLDNLHQRARQTAFLVPGLTIVVRD
EFGLGDGGSKGEESFRFDGGISEFCEFLAGDRPVCDVLRFSGQGSFKETVPVLDEDGQMT
PSEVTRDLGVDVALRWGTGYDTTVRSFVNIIATPKGGTHVAGFEQAVAKTMNEVLRTKKM
LRVAEDDIVKDDALEGLTAVVTVRLAEPQFEGQTKEVLGTSAARRIVNNVISRELKAFLT
STKRDAAQQARVVMEKAVAAARTRIAARQHKDAQRRKTALESSSLPAKLADCRSDDVDRS
ELFIVEGDSALGTAKLARNSEFQALLPIRGKILNVQKSSVTDMLKNAECGAIIQVIGAGS
GRTFDIDAARYGKIIMMTDADVDGSHIRTLLLTLFHRYMRPMVEAGRVFAAVPPLHRIEL
VQPKKGQDKYVYTYSDRELRDKLMEFQSKNIRYKDSIQRYKGLGEMDADQLAETTMDPRR
RTLRRINLTDLDSAEQVFDLLMGNDVAPRKEFISSSAATLDRSRIDA
NT seq 2124 nt   +upstreamnt  +downstreamnt
gtgaccgccgagacatccgtgccgtccactgcgctgctggcaggagcagaccgggacgga
tccaactacaccgcgcggcacctgctcgtcctcgaggggctcgaggccgtacgcaagcgt
ccgggcatgtacatcggatcgaccgacagccgtggcctgatgcactgcctgtgggagatc
atcgacaactccgtcgacgaggccctgggtggttactgcgaccacatcgaagtgatcctc
cacgacgacgcctcggtcgaggtccgggacaacggccggggcatcccggtcgacgtcgag
cccaagaccggcctgtccggcgtcgaggtcgtcatgaccaagctgcacgccggcggcaag
ttcggcggtggcgcctacgccgcctccggcggcctgcacggtgtcggcgcctccgtggtg
aacgccctgtccgcccgcctggacatcgaggtcgacctcggcgggcacacccacgccatc
agtttccggcgcggggtccctgggacgttcgcgaaggccgggccggacgcgaagttcgag
gccgggagcgggctgcgcaaggtgaagaaggtccccaagagccgcaggggcacgcgcgtg
cggtactgggcggaccgccagatcttcctcaaggacgcgaagctctccctggacaacctg
caccagcgggcccgccagaccgcgttcctggtgcccggactgaccatcgtcgtccgcgac
gagttcggtctcggtgacggcggcagcaagggcgaggagtcgttccgcttcgacgggggc
atcagcgagttctgcgagttcctggccggcgaccggcctgtctgcgacgtcctgcgcttc
agtgggcagggcagcttcaaggagacggtcccggtcctggacgaggacggtcagatgacg
cccagcgaggtcacccgcgacctcggtgtcgacgtcgcactgcgctggggcaccggttac
gacaccacggtcaggtcgttcgtcaacatcatcgccacgcccaagggcggcacccacgtc
gccggcttcgagcaggccgtggccaagacgatgaacgaggtgctgcgcaccaagaagatg
ctgcgcgtcgccgaggacgacatcgtcaaggacgacgccctggaagggctgacggcggtc
gtcaccgtccgcctcgccgagccgcagttcgagggccagaccaaggaggtcctcggcacc
tcggcggcccgccggatcgtgaacaacgtgatcagcagggaactgaaggcgttcctcacc
tcgaccaagcgtgacgcggcccagcaggcccgagtggtcatggagaaggccgtcgccgcg
gcccgcacccgtatcgcggcgcgccagcacaaggacgcccagcgccgcaagacggccctg
gaatcgtcgtcgctgcccgcgaagctcgccgactgccgcagcgacgacgtcgaccgcagc
gagctgttcatcgtcgagggcgactccgctctgggcaccgccaagctcgcccgcaactcc
gagttccaggcgctgctgccgatccgcggcaagatcctcaacgtccagaagtcctccgtg
acggacatgctgaagaacgccgagtgcggggcgatcatccaggtcataggagccgggtcg
ggccgtaccttcgacatcgacgcggcccgctacggcaagatcatcatgatgaccgacgcc
gacgtggacggttcccacatccgcaccctgctgctgaccctcttccaccgctacatgcgg
cccatggtcgaggccggccgggtgttcgccgcggtgccgccgctgcaccgcatcgagctg
gtccagccgaagaagggccaggacaagtacgtctacacgtactcggaccgcgagctgcgc
gacaagctcatggagttccagagcaagaacatccggtacaaggactccatccagcgctac
aagggcctcggcgagatggacgccgaccagctggcggagaccaccatggacccgcgccgc
cggaccctgcgccggatcaacctgaccgacctggactccgccgagcaggtcttcgacctg
ctgatgggcaacgacgtcgcaccccgcaaggagttcatctccagctcggcggcgacgctg
gaccggtcgcgcatcgacgcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-Gene (1)   
   KITASATO (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system