KEGG T06511: HBA18

Salinivibrio costicola: HBA18_02230

Entry

HBA18_02230       CDS       T06511

Symbol

rsmH

Name

(GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH

K03438

16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]

Organism

scot Salinivibrio costicola

Brite

KEGG Orthology (KO) [BR:scot00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:scot03009]
    HBA18_02230 (rsmH)
Enzymes [BR:scot01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.199  16S rRNA (cytosine1402-N4)-methyltransferase
     HBA18_02230 (rsmH)
Ribosome biogenesis [BR:scot03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    HBA18_02230 (rsmH)

SSDB

Motif

Pfam:

Methyltransf_5 Methyltransf_31 FtsJ Methyltransf_24 DUF494 Methyltransf_25

Other DBs

NCBI-ProteinID:

QIR05297

Position

1:438830..439780

AA seq 316 aa
MSEQYTHVSVLLNESVDGLAIKPDGIYVDGTFGRGGHSRHILSQLGENGRLYAIDRDPRA
IEEAGTIKDPRFQIIHGPFSGIETYLTDLGLAGKVDGVLLDLGVSSPQLDDPTRGFSFLR
DGPLDMRMDPTAGQSAAQWLETASADDIAWVLKVFGEERFAKRIAHAIVKYREDEETPPL
ETTSQLAKLIDNTVPFKEKKKHPATRSFQAIRIYINSELDEIELALQGALAVLAPQGRLS
VISFHSLEDRMVKRFIRKQSKGPEVPRGVPLTEAQIAELGSAAMKPIGKAIKPSSQEIEH
NARARSSVLRVAEKLG

NT seq 951 nt +upstreamnt +downstreamnt
atgtcagaacaatatacccatgtatccgtccttttaaatgagtctgtggacggccttgcc
attaaacctgacggcatttatgtcgacggcacctttggccgtggcggccactcgcgacat
attttgtctcagttgggcgaaaacgggcgtttgtatgcgattgatcgcgatcctcgtgcc
atcgaagaagccggcaccatcaaggatccgcgtttccaaattatccatgggccattttcg
ggcattgaaacctacctcaccgatttaggattggcaggaaaagttgatggcgtgttgctc
gatttgggcgtgtcttcgccacagttggatgatccgacccgtggctttagttttttacgt
gatggtccgctcgatatgcgtatggacccgaccgccggccagtctgctgcgcagtggttg
gaaactgcaagcgccgatgacattgcttgggtactaaaagttttcggtgaagaacgcttt
gctaagcggattgctcatgcgatcgtcaaataccgtgaagatgaagagaccccgccactt
gaaaccaccagtcaactggccaagttgatcgacaacacggtgccgtttaaagagaagaaa
aagcatcccgcgacccgcagctttcaggcgatccgcatttatatcaacagtgagctcgat
gagatagaactggccttgcaaggcgcattggcggtgttggcgcctcaaggacgcttatcg
gtgatcagtttccactcactcgaagatcgcatggtgaaacgctttattcgcaaacaaagc
aaagggccggaggtgccgagaggggtgccgctgaccgaggcgcagattgctgaacttggt
tcggcggcgatgaaacccatcggtaaagcgatcaaaccatcgtcacaagaaattgaacac
aatgcacgtgcacgcagttcggtgctgcgtgtagcagaaaagcttggataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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