KEGG   Salinivibrio costicola: HBA18_13660
Entry
HBA18_13660       CDS       T06511                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
scot  Salinivibrio costicola
Brite
KEGG Orthology (KO) [BR:scot00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:scot02044]
    HBA18_13660 (tssC)
Secretion system [BR:scot02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HBA18_13660 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QIR07464
Position
2:43426..44898
AA seq 490 aa
MSTNESVLESPEVKEGGLLDEIMAQTRIAPSEEGYDVAKKGVAAFIENLIGNDQTKEPVN
KSLVDQMLVELDKKISAQMDEILHEDSFQQMESAWRGLKLFVDRTDFRENNKVDILHVTK
EELLDDFEFAPETTQSGLYKHVYSSGYGQFGGEPTGAIIGNYAFTPSTPDMKLLQYMGAL
GAMAHAPFISSVGPEFFGIESFEELPNIKDVKSIFESPKYTKWRALRESEDARYLGLTAP
RFLLRVPYDPTENPIKSFVYHENVSQSHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGP
QSGGAVEDLPVHVYESMGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSA
NSIQKPKVFPNTKEGKEAETNYKLGTQLPYMMIINRLAHYIKVLQREQIGSWKERQDLER
ELNTWLKQYVADQENPPADVRSRRPLRAAKIEVADVEGNPGWYQVSLAVRPHFKYMGANF
ELSLVGRLDQ
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgtcaacaaatgaatcggtgttagagtcgccagaagtcaaagaaggcggcttacttgac
gagatcatggctcaaacccgcattgcaccaagcgaagaaggctatgatgttgcaaagaaa
ggtgttgcagcatttattgaaaacctgattggtaacgatcaaaccaaagagcctgttaat
aagtcgctggtcgaccaaatgcttgtcgagctcgacaagaaaatcagtgcgcaaatggat
gaaattcttcacgaagactcatttcaacaaatggagtcggcgtggcgcggtttgaagctt
tttgtcgatcgcactgactttcgtgagaacaataaagtcgacattcttcatgtgaccaaa
gaagaactgctagacgactttgagtttgcgccggaaacgacacagtcaggcctttataaa
cacgtctattcatctggttatggacaattcggtggtgaaccgactggggccattattggt
aactatgcctttacaccgtcgacgccagatatgaagctgcttcaatatatgggcgcgttg
ggcgctatggcccacgcaccatttatctcgagcgtaggccctgaattttttggtattgag
tcttttgaagagctacctaacatcaaagatgtgaagtctatctttgaaagtccaaagtat
actaaatggcgtgcgctacgtgagtctgaagacgcgcgttacctgggtctaaccgcgcct
cgcttcttattgcgtgttccttatgacccgactgaaaaccccattaaatcatttgtctat
catgaaaatgtgagtcagtctcatgagcactacctttggggtaacactgcgttcgccttt
gcaactcgtctgactgatagctttgcaaaataccgttggtgtccaaacatcatcggtcct
caaagtggtggtgcggttgaagacctaccggttcacgtttatgagtcaatgggcgcgcta
cagagcaagatcccaaccgaagttctgatcaccgatcgcaaagagtttgaactggcagaa
gaaggctttatcgccctaaccatgcgtaagggtagcgacaatgctgcatttttctctgca
aactcgattcaaaagccgaaggtgttcccaaataccaaagaaggcaaggaagcagagacg
aactacaaactgggtacgcagctgccatacatgatgattatcaaccgtttagcgcactat
attaaagtgctacagcgcgagcagatcggttcttggaaagagcgtcaagatttggagcgt
gagctgaatacttggttgaagcaatatgtcgccgatcaagagaacccgcctgcagatgta
cgtagccgtcgtcctcttcgtgccgcaaaaattgaagtggctgatgttgaggggaatcca
ggttggtatcaggtttctcttgcggtgcgtcctcacttcaaatatatgggcgcgaacttt
gaactgtctcttgttggtaggcttgatcagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (7)   

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