KEGG   Spiroplasma chrysopicola: SCHRY_v1c00210
Entry
SCHRY_v1c00210    CDS       T02676                                 
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
scr  Spiroplasma chrysopicola
Pathway
scr00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:scr00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SCHRY_v1c00210 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:scr01007]
    SCHRY_v1c00210 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:scr03016]
    SCHRY_v1c00210 (lysS)
Enzymes [BR:scr01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     SCHRY_v1c00210 (lysS)
Amino acid related enzymes [BR:scr01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   SCHRY_v1c00210 (lysS)
Transfer RNA biogenesis [BR:scr03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    SCHRY_v1c00210 (lysS)
 Prokaryotic type
   Other AARSs
    SCHRY_v1c00210 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-GeneID: 16152344
NCBI-ProteinID: AGM24608
UniProt: R4U2D4
Position
30334..31836
AA seq 500 aa
MEGRNFSEQEIVRRNKLEKLVKEGIDPFVEAKFERTHTSQELETTFGHFSKEELSNIEKP
QLVKIAGRIKTFREAGKASFSTLQDQNGIFQIYVRQDAIGEEAYAKFLELDLGDIIGVEG
QMMKTNTGELTVRVNKFILLTKSLRPLPDKYHGISDIEERYRRRYVDLIMSPETKDVFIK
RSRIISYMREFFNSKGYLEVETPVLQPIHGGAAAKPFVTHHNTLDMDFYLRVATELPLKR
LIVGGFEGVYEIGRLFRNEGMDTRHNPEFTTVEIYIAYQDMSFMMQLTEDTICYIAEKLL
NTDEVTYSGQKISFKQPWKRWHMVDAIKEYSGVDFWEKMTFEQAKEIAKKNNIYVEKFHN
SVGHIINLFFEEFVENKLVQPTFIYGHPVEVSPLAKANAQDPRFTDRFELFINGREYANA
YSELNNPIEQYDRFVKQIEERHQGNDEASELDIDFVEALEYGMPPTGGLGIGIDRLVMLL
TGQESIKDVLLFPHMRPRGK
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggaaggccgtaattttagtgaacaagaaattgttcgtcgtaataaattagaaaaatta
gttaaagaaggaatagacccttttgttgaagcaaaatttgagagaacgcatacaagtcaa
gaattagaaacaacttttggtcatttttcaaaagaagaattaagtaatattgaaaagccc
caattagtaaaaattgctggtcgaattaaaacctttcgcgaagctggaaaggcaagtttt
tcaactttacaagatcagaatggcatttttcaaatttatgttcgccaagatgcaattggt
gaagaagcttatgccaaatttttagaattagatttgggggacatcattggagttgaagga
caaatgatgaaaactaatacaggggaattaacagtccgtgttaataaatttattttatta
acaaaaagtttacgtcctttaccagataaatatcatggaattagtgatattgaagaaaga
tatcgacgaagatatgttgatttaattatgtcaccagaaacaaaagatgtttttattaaa
agaagtagaattatttcttatatgcgcgaattttttaatagcaaaggatatttagaagtt
gaaacaccggttttacaaccaattcatgggggagcagcagcaaaaccattcgtaactcat
cataatactttagacatggatttctatttaagagtagcaacagagttgccactgaaaaga
ttaattgttggaggttttgaaggggtttatgaaattgggcgtttatttcgtaatgaagga
atggatactcgtcataacccagaatttacaacagttgaaatttatattgcctatcaagat
atgagtttcatgatgcaattaaccgaagacacaatttgttatattgctgaaaaattatta
aatacagatgaagtaacttattcaggtcaaaaaattagttttaaacaaccatgaaaacgt
tgacatatggttgatgcgattaaagaatatagtggtgttgatttttgagaaaaaatgact
tttgaacaagcaaaagaaattgccaaaaaaaataatatttatgttgaaaaatttcataat
tcagttggtcacattatcaatttattttttgaagaatttgttgaaaataaattagtccaa
ccaacttttatttacggtcatcctgttgaagtgtcaccattagcaaaagcaaatgctcaa
gaccctcgttttactgatcgctttgaattatttattaatggtcgtgaatatgctaatgcc
tattctgaattaaataatccaattgaacaatatgatcgttttgttaaacaaattgaggaa
cgccatcaaggaaatgatgaagcaagtgaattagacattgattttgttgaagcattagag
tatggaatgcccccaacgggtggattaggaattggaattgatcgattggtaatgttatta
acaggacaagagtcaattaaagatgttttattattccctcatatgcgtccaagaggaaaa
tag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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