KEGG   Sorangium cellulosum So0157-2: SCE1572_03070
Entry
SCE1572_03070     CDS       T02718                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
scu  Sorangium cellulosum So0157-2
Pathway
scu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:scu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SCE1572_03070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scu03021]
    SCE1572_03070
   03400 DNA repair and recombination proteins [BR:scu03400]
    SCE1572_03070
Enzymes [BR:scu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SCE1572_03070
Transcription machinery [BR:scu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SCE1572_03070
DNA repair and recombination proteins [BR:scu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SCE1572_03070
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45
Other DBs
NCBI-ProteinID: AGP32076
UniProt: S4XHR8
Position
810171..814307
AA seq 1378 aa
MPSVVQSNFRVRKNLGRVRRIIDVPNLIDIQKSSYDKFLQMSVPPNEREEVGLQAVFRSV
FPIKDFNGTSELVFVSYNLEPPKYDVDECRQRGMTYSAPIKVTNQLMIYDTRDGGERIVR
DIKEQEVYFGELPLMTETGTFIINGTERVVVSQLHRSPGVFFDHDKGKTHSSGKLLYSAR
VIPYRGSWLDFEFDPKDIIYVRIDRRRKMHATVLLRALGYSTQDLLNYFYSTETVYLEKG
GKYSKSIEYDLLAGQRTTRDIKIGNDVIVKKNTKFTRAAIRKMKEAKLERLSLEPEELVG
KVAAHDIVDPETGEVVVEVNEELTEAKLERLRDANIEQFRILFIDGLNVGSYLRDTLLTD
KVKTMEDAILEIYRRLRPGDPPTLETAKTLFHNLFFNAERYDLSKVGRLKLNYKFYRDVP
EDERPGLDLTVLTPQDILETVRHLIELKNGRGSVDDIDHLGNRRVRAVGELMENQYRIGL
VRMERAIKERMSMSQEIDTLMPHDLINAKPVSAVVKEYFGSSQLSQFMDQTNPLSEVTHK
RRLSALGPGGLTRERAGFEVRDVHATHYGRICPIETPEGPNIGLIASLSTFARVNEFGFV
ETPYRKVENGRVTEDVIWLSALEEEGKYIAQATVNLDESGRFKESLVSARYNGEFKIVTP
EMVELMDVAPNQMVSVAAALVPFLEHDDANRALMGANMQRQAVPLVQSHAPLVGTGMEER
LARDSGVCVIARRPGVVESVDATRIVVRAEGEGAEVPDIYHLMKFQRSNQSTCYTQKPVV
RTGEVVKKGDVLADGPSTDMGELALGQNVLVAFMPWQGYNFEDSILVSERIAKDDVFTSI
HIEEFECVARDTKLGKEEITRDIPNVGEEALKDLDDSGIVRIGAEVRPGDILVGKITPKG
ETQLSPEEKLLRAIFGEKAGDVRDSSLKVPPGVGGIVINARVFSRKGTEKDDRARDIEDQ
ERARIERTRDEEIKILRDSFFRRIRELLLGKEATGKLVDDKGKVLFQKGAIIDEASLAEI
PRKYWGEIPVDDAERVQQILRDLEELVRTREEHFRDKIDRLSKGDELPPGVIKMVKVYIA
IKRKLQVGDKMAGRHGNKGVISRILPEEDMPYLQDGRPVDLVLNPLGVPSRMNVGQILEI
HLGWGAFELGNQLQSMLEQQRATAEIKEHLKAIYAGDESMAGFFDDLDDGDVKRFVKTVD
EGVFMGSPVFDGAHESDIKGALELAGLPTSGQAILFDGRTGDAFDQNVTVGIMYMLKLHH
LVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAYGAAYALQEFLTVKSDD
VMGRTRMYEAIVKGDYTLEAGLPESFNVLIKELQSLCLNVELVETSGGVEASAAEEEE
NT seq 4137 nt   +upstreamnt  +downstreamnt
atgccgtcggtcgtccaatccaacttccgcgtccgtaagaacctgggtcgcgttcgtcgc
atcatcgacgtccccaacctgatcgacatccagaagtcgagctacgacaaattcctccag
atgtccgttccgccgaacgagcgggaggaggtcgggcttcaggcggtgttccgctcggtc
ttcccgatcaaggacttcaacggcacgagcgagctcgtcttcgtctcgtacaacctcgag
ccgccgaagtacgacgtcgacgagtgtcgccagcgcggcatgacctactcggccccgatc
aaggtcacgaaccagctgatgatctacgacacccgcgacggcggggagcggatcgtgcgc
gacatcaaggagcaggaggtctacttcggcgagctcccgctgatgaccgagacgggcacg
ttcatcatcaacgggaccgagcgcgtcgtcgtcagccagctgcaccgcagccccggcgtc
ttcttcgaccacgacaagggcaagacgcactcgagcggcaagctgctctactccgcgcgc
gtcatcccgtaccgcggctcgtggctcgacttcgagttcgacccgaaggacatcatctac
gtgcgcatcgatcggcggcggaagatgcacgcgaccgtgctgctgcgcgcgctcgggtac
tcgacgcaggacctgctgaactacttctattcgaccgagaccgtgtacctggagaagggg
ggcaagtactcgaagagcatcgagtacgatctcctcgccggtcagcggacgacgcgcgac
atcaagattggcaacgacgtcatcgtcaagaagaacacgaagttcacccgcgccgccatc
cggaagatgaaggaggcgaagctcgagcggctcagcctcgagccggaggagctcgtcggg
aaggtcgccgcgcacgacatcgtcgacccggagacgggcgaggtcgtggtcgaggtcaac
gaggagctcaccgaggcgaagctcgagcggctgcgtgacgcgaacatcgagcagttccgc
atcctcttcatcgacggcctgaacgtgggctcgtacctccgcgacacgctcctcaccgac
aaggtgaagacgatggaggacgcgatcctcgagatctaccgccggctgcggcccggcgat
ccgccgacgctcgagaccgcgaagaccctgttccacaacctgttcttcaacgccgagcgc
tacgacctgtcgaaggtcggccggctgaagctgaactacaagttctaccgggacgtcccc
gaggacgagcggccggggctcgatctcacggtgctcacgccgcaggacatcctggagacg
gtgcgccacctgatcgagctgaagaacgggcgcggctcggtcgacgacatcgaccacctc
ggcaaccgccgcgtccgcgcggtcggcgagctgatggagaatcagtatcgcatcggcctc
gtccgcatggagcgcgcgatcaaggagcgcatgagcatgtcgcaggagatcgacacgctc
atgccccacgacctgatcaacgcgaagccggtcagcgcggtcgtgaaggagtacttcggg
agctcgcagctctcgcagttcatggaccagaccaacccgctctccgaggtcacccacaag
cgccggctctcggcgctcgggccgggcggcctcacccgcgagcgggccgggttcgaggtg
cgcgacgtccacgcgacccactacgggcgcatctgcccgatcgagacgccggaaggcccg
aacatcggcctcatcgcctcgctgtcgacgttcgcccgcgtgaacgagttcggcttcgtc
gagacgccgtaccgcaaggtcgagaacggccgcgtgaccgaggacgtgatctggctctcc
gcgctcgaggaagagggcaagtacatcgcgcaggcgaccgtgaacctcgacgagagcggg
cgcttcaaggagtcgctcgtctcggcccgctacaacggcgagttcaagatcgtcacgccc
gagatggtggagctcatggacgtcgcgccgaaccagatggtgtcggtcgccgccgcgctc
gtgcccttcctcgagcacgacgacgcgaaccgcgcgctcatgggcgccaacatgcagcgc
caggccgtgccgctcgtccagtcgcacgcgccgctcgtgggcaccggcatggaggagcgg
ctcgcccgcgactccggcgtctgcgtgatcgcgcggcgccccggcgtcgtcgagagcgtc
gacgcgacgcgcatcgtcgtccgggccgagggcgagggcgccgaggtgccggacatctat
cacctcatgaagttccagcgctcgaaccagtcgacctgctacacgcagaagccggtcgtc
cggacgggcgaggtggtgaagaagggcgacgtgctcgccgacggcccgtcgacggacatg
ggcgagctcgcgctcggccagaacgtgctcgtcgcgttcatgccgtggcagggctacaac
ttcgaggactccatcctcgtgtccgagcgcatcgccaaggacgacgtgttcacctcgatc
cacatcgaggagttcgagtgcgtcgcccgcgacacgaagctcggcaaggaggagatcacc
cgcgacatcccgaacgtcggcgaggaggcgctcaaggacctcgacgactccggcatcgtc
cgcatcggggccgaggtgcgcccgggcgacatcctggtcggcaagatcaccccgaagggc
gagacccagctctcgcccgaggagaagctgctccgcgcgatcttcggcgagaaggccggc
gacgtgcgcgacagctcgctcaaggtgccgcccggcgtcggcgggatcgtcatcaacgcc
cgcgtgttctcgcgcaaggggaccgagaaggacgaccgcgcgcgggacatcgaggaccag
gagcgggcccggatcgagcggacgcgcgacgaggagatcaagatcctccgcgactcgttc
ttccgccgcatccgcgagctcctcctcggcaaggaggcgacgggcaagctcgtcgacgac
aagggcaaggtgctcttccagaagggcgccatcatcgacgaggcctcgctcgccgagatc
ccccgcaaatactggggcgagatccccgtcgacgacgccgagcgggtccagcagatcctg
cgggacctcgaggagctcgtccgcacgcgcgaggagcacttccgggacaagatcgatcgc
ctgtccaagggcgacgagctgccgccgggcgtcatcaagatggtgaaggtctatatcgcc
atcaagcgcaagctccaggtcggcgacaagatggcgggccgccacggcaacaagggcgtc
atcagccgcatcctccccgaggaggacatgccgtacctgcaggacggcaggccggtcgat
ctcgtgctcaacccgctcggcgtgccgagccgcatgaacgtcggtcagatcctcgagatc
cacctcgggtggggcgccttcgagctcggcaaccagctgcagagcatgctcgagcagcag
cgggcgaccgccgagatcaaggagcacctgaaggccatctacgcgggcgacgagtcgatg
gccggcttcttcgacgacctcgacgacggcgacgtcaagcgcttcgtcaagacggtcgac
gagggcgtcttcatgggatcgccggtgttcgacggcgctcatgagtcggatatcaagggc
gctctcgagctcgcgggtctcccgacctcgggccaggcgatcctcttcgacgggcgcacg
ggcgatgcgttcgatcagaacgtcacggtgggcatcatgtacatgctgaagctccaccac
ctggtcgacgacaagatccacgcgcgctcgatcgggccctactctctcgtcacgcagcag
cccctcggcggcaaggcgcagttcggcgggcagcggctcggcgagatggaggtctgggcg
atggaagcctacggcgcggcctacgcgctgcaggagttcctcaccgtgaagagcgacgac
gtgatgggccgcacccggatgtacgaggccatcgtgaagggggattacaccctggaggcg
gggctgccggagagcttcaacgtgctcatcaaggagctccagtcgctgtgcctgaacgtg
gagctggtcgagacgagcggaggcgtggaggcctcggccgcggaggaagaggagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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