KEGG T03687: TU94

Streptomyces cyaneogriseus: TU94_18750

Entry

TU94_18750        CDS       T03687

Name

(GenBank) Fis family transcriptional regulator

K14415

tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

Organism

scw Streptomyces cyaneogriseus

Brite

KEGG Orthology (KO) [BR:scw00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:scw03016]
    TU94_18750
Enzymes [BR:scw01000]
6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     TU94_18750
Transfer RNA biogenesis [BR:scw03016]
Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    TU94_18750
Prokaryotic type
   tRNA splicing ligases
    TU94_18750

SSDB

Motif

Pfam:

RtcB

Other DBs

NCBI-ProteinID:

AJP03211

UniProt:

A0A0C5GFQ1

Position

4453644..4454837

AA seq 397 aa
MSYVELPGARVPIRMWTDPASVEEVALQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMQGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSRLRSRIEQAIPVGRGMHDDPVDPG
RLHGFATAGWDGFWERFGSVAEAVRFRAERAARQMGTLGGGNHFVEVCLDTDGAVWLMLH
SGSRNIGKELAEHHIGVARELPHNQGLVDRDLAVFVADTPQMAAYRNDLFWAQEYARYNR
SIMMALLKDVVRKEFKKAKPAFEPEISAHHNYVAEERYDGMDLLVTRKGAIRAGSGDYGI
IPGSMGTGSYIVRGLGNDKAFNSASHGAGRRMSRNAAKRRFTTQDLEEQTRGVECRKDSG
VVDEIPGAYKPIEQVIDQQRDLVEVVAKLKQVVCVKG

NT seq 1194 nt +upstreamnt +downstreamnt
atgtcgtatgtggagctgccgggtgcgcgggtgccgatccggatgtggaccgatcccgcc
tcggtcgaggaggtggcgttgcagcagttgcggaacgtcgccacgctgccgtggatcaag
ggtctggccgtgatgcccgacgtgcactacggcaagggcgccacggtcggctccgtcatc
gccatgcagggcgcggtgtgcccggcggcggtgggcgtcgacatcgggtgcgggatgtcc
gcggtgaagacgtcgctgacggcgaacgacctgccgggggacctgtcccggctgcggtcg
cggatcgagcaggcgataccggtgggacgcgggatgcacgacgacccggtcgaccccggg
cggctgcacgggttcgcgacggccggctgggacggcttctgggagcggttcgggtcggtc
gccgaggcggtccggttccgtgcggagcgcgcggcccggcagatggggacgctgggcggc
ggcaaccacttcgtcgaggtgtgcctggacaccgacggcgccgtgtggctgatgctgcac
tccggctcccgcaacatcggcaaggaactggccgagcaccacatcggcgtggcccgggag
cttccccacaaccagggcctggtcgaccgcgacctcgccgtcttcgtggcggacacgccg
cagatggcggcgtaccgcaacgacctgttctgggcgcaggagtacgcccggtacaaccgc
tcgatcatgatggccctcctgaaggacgtggtccgcaaggagttcaagaaggcgaagccc
gccttcgagccggagatcagcgcgcaccacaactacgtggccgaggagcgctacgacggc
atggacctgctcgtcacccgcaagggcgcgatccgcgcgggctcgggcgactacggcatc
atcccgggctccatgggcacgggctcgtacatcgtcaggggcctcgggaacgacaaggcg
ttcaactcggcctcgcacggcgccggccggcgcatgagccgcaacgccgccaagcggcgc
ttcacgacccaggacctggaggagcagacccggggcgtggagtgccgcaaggactccggc
gtcgtggacgagatcccgggcgcctacaagccgatcgagcaggtcatcgaccagcagcgg
gatctggtggaagtggtggcgaagctcaagcaggtcgtctgcgtgaagggctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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