KEGG   Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCATT_35570
Entry
SCATT_35570       CDS       T02095                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
scy  Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Pathway
scy03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:scy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SCATT_35570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scy03021]
    SCATT_35570
   03400 DNA repair and recombination proteins [BR:scy03400]
    SCATT_35570
Enzymes [BR:scy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SCATT_35570
Transcription machinery [BR:scy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SCATT_35570
DNA repair and recombination proteins [BR:scy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SCATT_35570
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 TarH
Other DBs
NCBI-ProteinID: AEW95928
UniProt: F8JYD3
Position
3782977..3786876
AA seq 1299 aa
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDEERRTRDLPSLEAHVSVERQQIEQRRDADIEARQKKLEAD
LAELEAEGAKTDARRKVRDGAEREMKQLRDRAQREIDRLDEVWSRFKSLKVQDLEGDELL
YRELRDRFGTYFQGGMGAAALQKRLESFDLEEEAAKLREIIRTGKGQKKTRALKRLKVVS
AFLQTRNSPMGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDSDEREVRGE
GRAFGSVAEAIMAFDARELTLQAKVDIRFPAGTVPPRGWTAPEPAEGEEPWQPGDAFRLR
TTLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVVVAATLDNLKSAGFHWAT
RSGVTVAISDVVVPEAKKTILEGYEAQDEKVQKQYERGLITKEERSQELIAIWTKATNEV
AEAMNDNFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLT
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIRELDCGTDRGLKLEIGERG
ADGVLRKSGGVETSVYARSLAEDIVVDGKVLAPAGTDLGDVLIDQLIAHGVQTVKVRSIL
TCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
KGLPRVVELFEARTPKGVAPISEAAGRVRIEETEKTRKIVITPDDGSDEIAYGVSKRARL
LVDEGDHVEVGQKLMAGTENPHDVLRILGQRAVQIHLLGEVQKVFTSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERGRFEQENRRVVSEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAIHAKSDALLGLKENVILGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNA
NT seq 3900 nt   +upstreamnt  +downstreamnt
gtgctcgacgtcaacttcttcgacgagctgcggatcggcctggccaccgcggacgacatc
cgtcagtggtcgcacggcgaggttaagaagccggagaccatcaactaccgcaccctcaag
ccggaaaaggacgggctcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggtaagtacaagcgggtccgcttcaagggcatcatctgcgagcggtgcggcgtc
gaggtgacccgtgccaaggtgcgccgtgagcggatgggccacatcgagctggccgccccg
gtgacccacatctggtacttcaagggcgtcccgtcccgcctgggctacctgctcgacctg
gcgccgaaggacctggagaaggtcatctacttcgccgcctacatgatcacgtgggtggac
gaggagcgccgcacccgtgacctgccgtcgctggaggcgcacgtctccgtcgagcggcag
cagatcgagcagcgccgcgacgcggacatcgaggcccggcagaagaagctcgaggccgac
ctcgccgagctggaggcggagggcgccaagaccgacgcccgccgcaaggtccgcgacggc
gccgagcgggagatgaagcagctgcgcgaccgcgcccagcgcgagatcgaccgcctcgac
gaggtgtggagccgcttcaagtcgctcaaggtccaggacctggagggcgacgagctgctc
taccgcgagctgcgcgaccgcttcggcacctacttccagggcggcatgggcgccgcggcg
ctccagaagcgcctggagtccttcgacctggaggaggaggccgccaagctccgcgagatc
atccgcaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gccttcctgcagacccgcaacagcccgatgggcatggtgctcgactgcgtcccggtgatc
ccgccggacctgcggccgatggtccagctcgacggtggccgcttcgccacctccgacctg
aacgacctgtaccgccgggtgatcaaccggaacaaccgcctcaagcgtctgctggacctc
ggtgcccccgagatcatcgtgaacaacgagaagcggatgctccaggaggccgtcgacgcg
ctcttcgacaacggccgccgtggccgcccggtgacgggccccggcaaccgtccgctgaag
tcgctctccgacatgctcaagggcaagcagggccgcttccggcagaacctgctcggcaag
cgcgtcgactactccgcccgttcggtgatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgcccaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtggacctcaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgcggccgt
acggtcgtgtacgacgtgctggaagaggtcatcgccgagcacccggtgctgctcaaccgg
gcgccgacgctgcaccgcctgggcatccaggcgttcgagccgcagctggtcgaaggcaag
gccatccagatccacccgctggtgtgcaccgcgttcaacgcggacttcgacggcgaccag
atggcggtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagcccgccgacggccgtccggtgacgatgccgacgcaggac
atggtcctgggtctgttcttcctcaccacggactccgacgagcgcgaggtgcgcggcgag
ggccgggcgttcggctcggtggccgaggcgatcatggccttcgacgcccgcgagctgacc
ctccaggcgaaggtggacatccgcttcccggcgggcaccgtgccgccgcgcggctggacg
gcgccggagccggccgagggcgaggagccctggcagcccggtgacgcgttccggctgcgg
accaccctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactcggtgggcaagaagcagctctccgagatcgtcaacgacctggccgagcggtacccc
aaggtcgtcgtggcggcgaccctggacaacctgaagtcggccggtttccactgggcgacc
cgctccggcgtcaccgtcgccatctcggacgtcgtggtccccgaggccaagaagacgatc
ctggagggctacgaggcgcaggacgagaaggtccagaagcagtacgagcgcggcctgatc
acgaaggaagagcggtcccaggagctgatcgcgatctggaccaaggcgaccaacgaggtc
gccgaggccatgaacgacaacttcccgaagaccaacccgatcttcatgatggtcgactcg
ggcgcgcgcggaaacatgatgcagatgcgtcagatcgcgggtatgcgtggtctggtgtcg
aacgcgaagaacgagaccatcccgcggccgatcaaggcgtcgttccgcgagggcctcacc
gtgctggagtacttcatctccacccacggtgcccgtaagggtctcgccgacaccgcgctg
cgtaccgccgactcgggttacctgacccgtcgtctggtggacgtctcgcaggacgtcatc
atccgcgagctggactgcggcaccgaccgcggcctgaagctggagatcggcgagcggggc
gcggacggcgtgctgcgcaagtccggcggcgtcgagaccagcgtgtacgcgcgcagcctg
gccgaggacatcgtggtcgacggcaaggtgctggccccggccggcaccgacctcggcgac
gtgctcatcgaccagctgatcgcgcacggcgtgcagaccgtcaaggtccgctcgatcctc
acctgcgagtccgcggtgggcacctgcgcgatgtgctacggccgttcgctggccaccggc
aagctggtggacatcggcgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggcacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
aagggtctgccgcgtgtcgtcgagctcttcgaggcccgtacccccaagggtgtggccccg
atcagcgaggcggccggccgggtccgcatcgaggagaccgagaagacccgcaagatcgtc
atcaccccggacgacggcagcgacgagatcgcctacggcgtctccaagcgcgcccgtctg
ctggtggacgagggcgaccacgtcgaggtcggccagaagctgatggccggtaccgagaac
ccgcacgacgtgctgcggatcctcggccagcgggccgtccagatccacctgctcggcgag
gtccagaaggtcttcacctcgcagggtgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgggtgacgatcatcgagtccggcgacgccgagctgctgccg
ggcgagctggtcgagcgcggtcgcttcgagcaggagaaccgccgggtcgtctccgagggc
ggtcaccccgcctccggccgtccgcagctgatgggtatcaccaaggcgtcgctggcgacc
gagtcgtggctgtccgcggcctcgttccaggagaccacccgggtgctcaccgacgcggcg
atccacgccaagtcggacgcgctgctcggcctgaaggagaacgtcatcctcggtaagctc
atcccggccggtacgggtctgtcccgctaccgcaacatccgggtggagccgaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
accggctccggccaggcggtcccgctggaggactacgactacggtccgtacaacgcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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