KEGG   Streptococcus dysgalactiae subsp. equisimilis RE378: GGS_0229
Entry
GGS_0229          CDS       T02269                                 
Symbol
polC
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
sda  Streptococcus dysgalactiae subsp. equisimilis RE378
Pathway
sda03030  DNA replication
sda03430  Mismatch repair
sda03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GGS_0229 (polC)
   03430 Mismatch repair
    GGS_0229 (polC)
   03440 Homologous recombination
    GGS_0229 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sda03032]
    GGS_0229 (polC)
   03400 DNA repair and recombination proteins [BR:sda03400]
    GGS_0229 (polC)
Enzymes [BR:sda01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GGS_0229 (polC)
DNA replication proteins [BR:sda03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GGS_0229 (polC)
DNA repair and recombination proteins [BR:sda03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GGS_0229 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T DNA_pol3_finger PHP DNA_pol3_a_NII DNA_pol3_a_NI HHH_6 tRNA_anti-codon RNase_H_2 Rv2179c-like DEDDh_C HHH_3 DUF2507 Zn-ribbon_8 Auto_anti-p27
Other DBs
NCBI-ProteinID: BAM60402
UniProt: A0A9W3ZRC3
Position
230013..234410
AA seq 1465 aa
MSDLFVKLMEQIEMPLDMRRSSAFSSADIIEVKVHSVSRLWEFHFAFAEILPIATYRELH
DRLIRTFEAADIKVTFDIQAAQVDYSDDVLQAYYQEAFEHAPCNGASFKSSFAKLKVTYE
NDKLIIAAPRFVNNDHFRKNHLPNLVKQFEAFGFGTLTIDIVSDQEMTEHLTKDFVSSRQ
ALVEKAVQDNLEAQKSLEAMMPPAEEATPAPKFDYKERVAQRQAGFEKAAITPMIEIETE
ENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFALQKWAKDDEELRKFDMIAKGAWL
RVQGNIETNPFTKSLTMNVQQVKEIVHHERKDLMPEGQKRVEFHAHTNMSTMDALPTVES
LIDTAAKWGHKAVAITDHANVQSFPHGYHRARKAGIKAIFGLEANIVEDKVPISYDPVDM
DLHEATYVVFDVETTGLSAMNNDLIQIAASKMFKGNIVEQFDEFIDPGHPLSAFTTELTG
ITDKHLQGAKPLVTVLKAFQDFCKDSILVAHNASFDVGFMNANYERHNLPKITQPVIDTL
EFARNLYPEYKRHGLGPLTKRFQVSLDHHHMANYDAEATGRLLFIFLRDAREKHGIKNLL
QLNTDLVAEDSYKKARIKHATIYVQNQVGLKNMFKLVSLSNIKYFEGVPRIPRTVLDAHR
EGLLLGTACSDGEVFDAVLTKGIDAAVDLAKYYDFIEIMPPAIYQPLVVRELIKDQAGIE
QVIRDLIEVGKRANKPVLATGNVHYLEPEEEIYREIIVRSLGQGAMINRTIGRGEGAQPA
PLPKAHFRATNEMLDEFAFLGKDIAYQVVVQNTQDMADRIEEVEVVKGDLYTPYIDKAEE
TVAELTYQKAFEIYGNPLPDIIDLRIEKELTSILGNGFAVIYLASQMLVNRSNERGYLVG
SRGSVGSSFVATMIGITEVNPMPPHYVCPSCQHSEFITDGSVGSGYDLPNKPCPKCGTPY
QKDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRDIFGAEYAFRAGTVGTVAEK
TAYGFVKGYERDYGKFYRDAEVDRLAAGAAGVKRTTGQHPGGIVVIPNYMDVYDFTPVQY
PADDVTASWQTTHFNFHDIDENVLKLDILGHDDPTMIRKLQDLSGIDPITIPADDPGVMA
LFSGTEVLGVTPEQIGTPTGMLGIPEFGTNFVRGMVNETHPTTFAELLQLSGLSHGTDVW
LGNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGLWLKISEEERN
GYIDAMRENNVPDWYIESCGKIKYMFPKAHAAAYVLMALRVAYFKVHHPIMYYCAYFSIR
AKAFELKTMSGGLDAVKARMEDITIKRKNNEATNVENDLFTTLEIVNEMLERGFKFGKLD
LYKSKATEFQIEGDTLIPPFVALEGLGENVAKQIVKARQEGEFLSKMELRKRGGASSTLV
EKMDDMGILGNMPDDNQLSLFDDFF
NT seq 4398 nt   +upstreamnt  +downstreamnt
atgtcagacttattcgttaaattgatggaacagatagaaatgccgcttgacatgagacgt
tcaagtgctttttcgtctgctgatattatcgaggtgaaggtgcattcggtatcacgtttg
tgggaatttcattttgctttcgcggagattttaccgattgcaacctatcgtgaattgcat
gatcgtttgatacgaacctttgaggcggctgacattaaggtaacctttgatattcaggct
gctcaggtggattattcagatgatgtgcttcaagcttattaccaagaagcttttgaacat
gcaccttgtaatggggctagttttaaatcctcttttgcaaagctcaaagtgacttatgag
aatgacaaactcattattgcagcgccgcgttttgttaataatgaccattttagaaaaaat
catctgcctaatttggtcaaacaatttgaagcttttggctttggcaccttaaccattgat
atagtgtcagatcaggagatgactgagcatttgaccaaggattttgtttccagtcgtcag
gctcttgtggaaaaggctgtgcaggataatttggaagcccaaaaatcccttgaggccatg
atgccaccggctgaagaagcaacacctgctcctaaatttgattataaagagcgcgtggcg
cagcgtcaggcaggatttgaaaaagcagccatcacaccaatgatagagattgagaccgaa
gaaaaccgaattgtctttgaggggatggtttttgatgtggagcgcaagaccactaggaca
ggtcgccatatcatcaactttaaaatgacagattatacctcctcgtttgctctgcaaaaa
tgggccaaagacgatgaggagctccgtaaatttgatatgattgctaagggggcttggtta
cgggtacaagggaatattgagaccaatccttttacgaagagtctcaccatgaatgtccag
caggtcaaagaaattgtacatcatgagcgcaaagacctgatgccagaagggcaaaaacgg
gttgagtttcatgcccacaccaatatgtctaccatggatgccttaccgacagtagaaagc
ttgattgatacggcagccaagtggggacacaaggcggttgctattaccgatcatgctaat
gtgcaaagttttcctcatggctaccatagggctcgcaaagctggaattaaggctattttt
ggcctagaagccaatattgttgaggacaaggtgcctatttcttatgatcctgttgatatg
gatttgcacgaagctacctatgtggtctttgacgtggaaaccacaggcctatctgctatg
aataatgacctgattcagattgcggcttccaaaatgtttaaaggaaatattgtagagcag
tttgatgaattcattgatcctgggcatcctctttctgcctttaccaccgaattgacaggg
attaccgataagcatttgcagggcgccaagccattggttaccgtcctaaaagcttttcag
gacttttgcaaagatagtatcttggttgcccacaacgccagttttgacgtgggctttatg
aacgccaattatgaacgccacaacttgcccaaaatcacacagcctgtgattgatacctta
gaatttgctagaaacttgtatcctgaatacaagcgtcacggtttgggaccgctcaccaag
cgtttccaagtgagtctagaccaccatcatatggccaattacgacgcggaagccacagga
cgtcttttgtttatttttctaagagatgccagagaaaagcatggcatcaaaaacctttta
caactcaatacagatttggtggctgaggattcttacaaaaaagcgcggattaagcatgcg
actatctatgtgcaaaatcaggttggtcttaaaaatatgtttaagttggtcagcctttcc
aatatcaaatattttgaaggagttcctcgtattccaagaactgtcttagatgctcacaga
gaggggttgttactaggaacagcttgttcggatggggaagtttttgatgccgttctgact
aaaggaattgatgcggcggttgatttagctaagtattatgattttatcgaaatcatgccc
ccagccatttaccagccattggttgtccgtgaattaatcaaagaccaagcaggtattgag
caggtgattcgtgaccttattgaagtagggaaacgagctaataagccagttcttgctact
gggaatgtgcattatctagagcctgaagaagagatttaccgtgaaattattgtgcgtagt
ctcggtcagggtgccatgattaatagaacaatcggccgtggggaaggggcccaacctgct
cccctacctaaagcgcactttagagcaactaatgaaatgctggatgagtttgcctttctt
ggaaaagacatcgcttatcaagtggttgtgcaaaatactcaggatatggcggaccgcatt
gaggaagtggaagtggttaagggagacctctataccccgtatatcgacaaggctgaagag
acggttgccgaattaacctatcaaaaagcgtttgaaatttatggtaatcctctaccagat
attatcgatttgcgaattgaaaaagagctaacctctatcttggggaacggctttgccgtg
atttacctagcgtcacaaatgcttgttaaccggtcaaatgagcgaggctatctggttggt
tctaggggatctgttgggtccagttttgtggcaaccatgatcgggattaccgaggttaat
cctatgccgcctcactacgtttgcccgtcctgccaacattctgaatttatcacagatggt
tcagtcggatcgggctatgatttacctaataagccttgtccaaaatgtggcaccccttat
caaaaagacggccaagatattccctttgagaccttccttggatttgacggggataaggta
cccgatattgatttgaacttctctggtgatgatcagccgagtgcccatttagatgttcga
gatatttttggtgctgagtatgcttttcgtgctggaaccgtaggtaccgtagcagaaaaa
acagcttatggatttgtcaaaggctatgaacgcgactatggcaagttctatcgtgatgct
gaggtggatcgtctagcagcaggagctgccggagtaaaacgaacaactgggcagcaccct
ggaggaattgttgttattcctaattacatggatgtttatgattttacccccgtgcaatat
ccagccgatgatgtaacggcttcttggcagacaactcactttaacttccacgatattgat
gagaacgtcttgaaacttgatatcctagggcatgatgatccgaccatgattcgtaaactt
caggatttatcgggcattgatcctattactatccctgctgatgatccaggtgttatggct
ctcttttctgggacagaggttttaggagtcactccagaacaaattggaacaccaactggc
atgctcggcattccagaatttggaaccaactttgttcgcggcatggttaacgaaacgcat
ccaaccacttttgcagaattgttgcagttgtctggactatctcatggaaccgatgtttgg
cttggtaatgcacaagatttgattaaagaaggcattgcgaccctaaaaaccgttatcggt
tgtcgtgacgacatcatggtttacctcatgcacgcaggcttagaaccaaaaatggccttt
accattatggagcgtgtgcgtaagggattatggctaaaaatttctgaggaagaacgtaat
ggctatattgatgccatgcgagaaaacaatgtgcccgactggtacattgaatcgtgtgga
aaaatcaagtacatgttccctaaagcccatgcggcagcttatgttttgatggcccttcgg
gtggcttatttcaaggtgcaccaccccattatgtattattgtgcttatttctctattcgt
gcgaaggcttttgaattaaaaaccatgagtggtggtttagatgctgttaaagcaagaatg
gaagatattactataaaacgtaaaaataatgaagccaccaatgtggaaaatgacctcttt
acaaccttggagatcgtgaatgagatgctggaacgtggttttaaatttggaaaactagac
ctttataagagtaaagcaacagagtttcaaatcgaaggggacacgctgattccaccattt
gttgccttagaaggtttgggtgaaaacgtggcgaagcaaatcgtgaaagctcgtcaagaa
ggggaattcctgtctaaaatggaactgcgtaaacgaggcggtgcctcgtcaacgctcgta
gaaaaaatggatgacatgggtattttaggcaatatgcctgatgacaaccaattaagccta
tttgatgatttcttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (28)   

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