KEGG T02333: SDSE

Streptococcus dysgalactiae subsp. equisimilis AC-2713: SDSE_1038

Entry

SDSE_1038         CDS       T02333

Symbol

topA

Name

(GenBank) K03168 DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

sdc Streptococcus dysgalactiae subsp. equisimilis AC-2713

Brite

KEGG Orthology (KO) [BR:sdc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sdc03032]
    SDSE_1038 (topA)
   03400 DNA repair and recombination proteins [BR:sdc03400]
    SDSE_1038 (topA)
Enzymes [BR:sdc01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     SDSE_1038 (topA)
DNA replication proteins [BR:sdc03032]
Prokaryotic type
  DNA Topoisomerases
   SDSE_1038 (topA)
DNA repair and recombination proteins [BR:sdc03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SDSE_1038 (topA)

SSDB

Motif

Pfam:

Topoisom_bac zf-C4_Topoisom Toprim C1_2 DUF2996

Other DBs

NCBI-ProteinID:

CCI62535

Position

complement(980201..982333)

AA seq 710 aa
MGTKTTTKPKTGTKKSTTKKKSAAKKNLVIVESPAKAKTIEKYLGRSYKVVASVGHIRDL
KKSSMSIDFDNNYEPQYINIRGKGPLINSLKKEAKAAKKVYLASDPDREGEAISWHLSHI
LGLDPEDKNRVVFNEITKDAVKNAFVEPRQIDMNLVDSQQARRVLDRIVGYSISPILWKK
VKKGLSAGRVQSVALKLIIDRENEIKAFVPEEYWSIDGLFKKGTKKFQASFYGLDGKKMK
LSNNDDVKAVLAKLKGDDFLVSKVEKKERRRNAPLPYTTSSLQQDAANKINFRTRKTMMV
AQQLYEGIHLGENGTQGLITYMRTDSTRISPVAQNDAAQFISNRFGANYSKHGNRVKNTS
GAQDAHEAIRPSSVNHTPEAIAKYLNKDQLKLYTLIWNRFVASQMTAAVFDTVKVNLEQN
GVLFVANGSQMKFDGYMAVYNDSDKNKMLPEMEEGETVKKVSTSPEQHFTQPPARYSEAT
LIKTLEENGVGRPSTYAPTLEVIQRRYYVKLSAKRFEPTELGEIVNKLIVEFFPDIVDVA
FTAEMEGKLDQVEIGEEEWQHVIDQFYQPFVKELNKAESEIEKIQIKDEPAGFDCDVCGH
PMVIKLGRFGKFYACSNFPECRNTKAITKEIGVTCPICHKGQVIERKTKRNRIFYGCDRY
PECDFTSWDLPVGRDCPKSGDYLVEKKVRGGGKQVVCSNETCDYKEEKIK

NT seq 2133 nt +upstreamnt +downstreamnt
ttgggaacaaaaactacaactaagccgaaaacggggactaaaaagtctaccactaaaaag
aaatcagcagcaaagaaaaatcttgttattgttgaatcacctgccaaagctaagactatt
gaaaaatatcttggacgcagttataaagttgtcgcttcagtagggcatattcgtgactta
aaaaaatcctctatgtctattgattttgataataattatgagccacaatacattaatatc
cgtggtaagggcccccttatcaactctttgaaaaaagaagccaaagctgctaaaaaagtt
tacttggcaagtgacccggaccgtgagggagaggctatttcttggcatttgtcacatatt
ctaggactcgatcctgaagataaaaaccgagtggttttcaatgaaattaccaaagatgcg
gtgaaaaatgcttttgtggaacctcgtcaaattgacatgaacttagtggattctcaacaa
gcccgtcgcgtcttggaccgtattgtaggttactccatctcacctattctttggaaaaag
gtcaaaaaaggcctttcagcaggacgtgtccagtcggttgctttaaaactcatcattgac
cgtgaaaatgaaatcaaagcctttgttccagaagaatactggtctattgatggcctcttc
aaaaaaggaaccaagaagtttcaagcaagtttttacggtcttgatggcaagaagatgaaa
ctttccaacaatgatgacgttaaagcagttcttgctaaattaaaaggtgatgatttcttg
gttagtaaggttgagaaaaaagagcgccgtcgaaatgccccattaccttatacgacctct
tctctacaacaagatgctgctaataaaatcaatttcagaacgcgtaaaaccatgatggta
gcccaacaactgtatgaggggattcatttgggagaaaacggaactcaaggtttaattacc
tatatgcgtactgattctacacggattagtcctgtagcgcaaaatgatgctgcccaattt
atcagtaatcgttttggagctaattattctaaacatgggaatcgtgtcaaaaataccagt
ggtgcccaagatgctcacgaggctattcgtccatctagcgtcaatcatacaccagaagct
attgccaaataccttaacaaggatcagttaaaactttatactctgatttggaatcgtttt
gtggctagccaaatgacagcagctgtttttgataccgtaaaggtgaatttggagcaaaat
ggcgtgctttttgttgccaatggaagccaaatgaaatttgacggttatatggctgtttac
aatgactcagataaaaacaaaatgttacctgaaatggaagaaggagaaaccgttaaaaag
gtatcaacttctccagaacagcacttcacgcaacctccggctcgctactccgaagcaact
ctgattaaaactttagaagaaaatggggtcggtcgaccatcaacttatgccccaacctta
gaagtgattcaacgcaggtactatgttaaattatctgctaagcgctttgagccaactgag
cttggggaaattgtcaacaagcttattgtcgaatttttcccagatattgttgatgttgcc
tttactgccgagatggaaggtaagctagatcaagttgaaatcggtgaagaagaatggcaa
catgtcatcgatcaattctatcaaccctttgtcaaagaattgaataaggctgagtctgaa
attgaaaagattcaaatcaaagatgagccagctggttttgactgtgatgtttgtggccac
ccaatggtcattaagttaggacgttttgggaaattttacgcgtgcagcaacttccctgag
tgtcgtaatacaaaagccatcactaaagaaatcggtgttacctgtcccatttgtcataag
ggacaagtcattgaacgaaaaactaagcgcaatcggatcttttatggttgtgatcgctac
ccagaatgtgacttcacttcttgggatttaccagttggacgtgactgtcctaagtctggt
gactatttggttgaaaagaaagtacgtggtggcggcaaacaagtggtttgtagcaatgaa
acgtgtgattacaaagaagaaaaaatcaaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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