KEGG   Saccharophagus degradans: Sde_0198
Entry
Sde_0198          CDS       T00335                                 
Name
(GenBank) Exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
sde  Saccharophagus degradans
Pathway
sde03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sde00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Sde_0198
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sde03400]
    Sde_0198
Enzymes [BR:sde01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     Sde_0198
DNA repair and recombination proteins [BR:sde03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Sde_0198
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2
Other DBs
NCBI-ProteinID: ABD79462
UniProt: Q21PB7
Position
complement(254575..256242)
AA seq 555 aa
MAGSEQGTEQGEGLDVFLNRIGTALKTQLPGSYWVRAEILKADTSKGNHLSLELASYDGS
QGAKARAWIWSSNINIVSSFEQSTGSSLKAGLKILFQCRVQFHPEFGLSLVVENIDPKFT
LGDMEAKLQAIRERLTSLNEINRNRYLDKPKDFCRVAVVSPESAAGLGDFKTIADRLEKY
NLCKFNYYPSLFQGANAVASIVSAISQVVVDIENGNQYDALAIVRGGGDKAGLYQLNEIK
IARCICRSPIPVLVGIGHERDSTILDEVANCRLATPSLVASFIQEAIVKNARDAKFNYEL
LVRSSQSISSFAKQELRDYRANISLLSHKKLESARRQVTEHNTSLTHVPNLLIQNAKRQN
EENYINIKLFSGRSIQQAKELVSESFRSAINDTKVNIRSIGSHIQQLKIDVIRRAHHSTS
TAKSSVQHYNIQMRQGASNSAHQAKSSVLYKYEESLKATKYYLGQQRNAIENESKSLRVN
AAQSLTAIKSDIKILVERVLLLDPSKILAKGFALIMSNEKKVLTTKKDVLKQKNVSLRLK
DGFVEAHILEDNHEQ
NT seq 1668 nt   +upstreamnt  +downstreamnt
atggcaggcagcgaacaaggaaccgaacaaggtgaaggacttgatgttttcctaaatcgg
attgggaccgcactcaaaacgcaattgccaggaagctattgggttcgcgcagaaatactc
aaagccgacacatcgaaaggtaatcatttatctttagagctagcatcctacgatggatcg
cagggagctaaagctcgcgcttggatctggtcatccaatatcaacattgtatcttctttt
gagcaatcaactggctccagcttgaaagccggtctaaaaattctttttcaatgccgggtg
cagtttcatcctgaatttggtctttctctggtcgtagagaatatcgatcctaaatttacg
ttaggcgacatggaggccaagctccaagcgattagagagcgcctaacttcgctgaacgag
attaaccgcaatagatatttggacaagcccaaagatttttgtcgcgtcgcggtggtatcg
ccagaatctgcagccggattaggcgactttaaaacaatcgctgatcgactggaaaaatat
aatctatgtaaatttaattattacccttctctatttcaaggtgcaaatgctgtggctagt
attgtttcagcaatttcacaagtcgttgtcgatatagaaaatggaaaccaatacgacgca
ttagccattgtgcggggaggtggagacaaagctgggctctatcaactcaacgaaattaaa
atcgctcgatgtatatgccgatctccgattcctgtgctcgttgggattggacatgagcgg
gactcaaccatactggatgaggttgccaattgccgccttgccactccttctctcgtagcc
agctttattcaagaagccattgttaaaaatgcaagggatgcaaaatttaactacgaatta
ctcgtgaggtcctcgcagtctatctcatcatttgcaaagcaagagctaagggattataga
gcaaacatttcccttttatcacataagaaactcgagtctgcaaggcggcaagttaccgaa
cataataccagcctcacacatgttccgaacttactgattcaaaacgcaaagagacaaaac
gaagaaaattacatcaacattaaactattttctggacgtagcatccaacaagccaaagag
cttgtaagcgaatcttttagatctgcaataaatgataccaaggttaacatacgaagcatt
ggttcacatatccagcaacttaagattgatgttatacggcgagcacatcactcaacttca
acggcaaaatcgtcagtccaacattacaatattcaaatgaggcaaggagcatcaaattcg
gctcaccaagctaaatccagtgtgctttataaatatgaagaatctctaaaagcaacaaag
tactatttggggcaacagcggaatgccatagaaaatgaaagtaaatcgctgagagtaaat
gctgcccaatcactcactgcaataaaaagtgacattaagatcttggtggaacgagtgcta
ctactggatccaagtaaaattctagcgaagggcttcgcgttgataatgtcgaatgaaaaa
aaggtattgaccactaaaaaggatgttctaaagcaaaaaaatgtaagtttaagattaaaa
gatggcttcgtagaagcccatatattggaggacaatcatgagcaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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