KEGG   Saccharophagus degradans: Sde_0366
Entry
Sde_0366          CDS       T00335                                 
Name
(GenBank) Type I secretion outer membrane protein, TolC
  KO
K12340  outer membrane protein
Organism
sde  Saccharophagus degradans
Pathway
sde01501  beta-Lactam resistance
sde01503  Cationic antimicrobial peptide (CAMP) resistance
sde02020  Two-component system
sde03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sde00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Sde_0366
  09132 Signal transduction
   02020 Two-component system
    Sde_0366
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Sde_0366
   01503 Cationic antimicrobial peptide (CAMP) resistance
    Sde_0366
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sde02000]
    Sde_0366
   02044 Secretion system [BR:sde02044]
    Sde_0366
   01504 Antimicrobial resistance genes [BR:sde01504]
    Sde_0366
Transporters [BR:sde02000]
 Other transporters
  Pores ion channels [TC:1]
   Sde_0366
Secretion system [BR:sde02044]
 Type I secretion system
  alpha-Hemolysin/cyclolysin transporter
   Sde_0366
  RTX toxin transporter
   Sde_0366
  Multiple protein transporter
   Sde_0366
  RaxAB-RaxC type I secretion system protein
   Sde_0366
Antimicrobial resistance genes [BR:sde01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump AcrEF-TolC [MD:M00696]
    Sde_0366
   Multidrug resistance, efflux pump MdtEF-TolC [MD:M00697]
    Sde_0366
SSDB
Motif
Pfam: OEP
Other DBs
NCBI-ProteinID: ABD79630
UniProt: Q21NU9
Position
complement(452979..454343)
AA seq 454 aa
MNKSLQKIIALAAFGFAAAAQHSQAETLAEIYQQALENDHSFLAAKAALEAGQENKNIGR
AGLLPQISAEASWADSENTTTEYDINATPTETSTTQNSTTTGYSVSLSQTLFNLASWHTY
KQGKARAQIAEVNYAAAEQEVIVRVAQAYFDALAAVDNFDTAKSEEEALKHQLEQTKQRF
EVGLTAITEVHEAQAAFDSSTATRLAAEGRLGIAFEALEVITGRPYRSLNPMRADFPVTA
PEPADRNQWVEFALANNFDLKAASLNAEAAQQNAKARRADHAPTLTAGVSYSDKTTEIGS
GFETNPENQTLSLTLKVPIYAGGATHASRRQANAQAWESRELFNKAQRDIIQQARSNHLE
VMTGVATVKARKQAITSSESALRATQAGYEVGTRDLVDVLNAQRSLFRARRDYSDALYAY
VVNTLKLKQVAGTLSTADIDALSGWLDTAKEVQY
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgaacaagtctttacaaaaaattatcgcgctcgcggcctttggatttgccgccgcagct
caacacagccaagcggaaacgctggccgagatataccagcaagcgctcgagaacgatcac
tcattcttggctgccaaagcggcgttagaagcgggccaagaaaacaaaaacattggtcgc
gcaggtttgttgccacaaataagtgccgaagcgagctgggcagatagcgaaaatacaaca
actgaatacgatataaatgctaccccaacagaaaccagcaccacacaaaacagcaccact
accggctatagcgtttcccttagccaaaccttattcaaccttgcaagctggcatacctat
aagcaaggtaaagctagggcgcaaattgctgaggttaactatgctgccgccgagcaagag
gtaatagtgcgggttgctcaagcttattttgatgcattggctgcggtagataatttcgat
acggctaaatctgaagaagaagcgcttaaacatcagttagagcaaaccaaacaacgcttt
gaagtgggcctaaccgccattaccgaagtgcacgaagcgcaagccgctttcgactcttca
accgcaacccgcctagctgctgaaggccgcttaggtattgcattcgaagccttagaagtt
attacgggtcgcccttaccggtcgctcaacccaatgcgtgcagacttccctgtaacggca
ccagaacctgccgatcgcaaccaatgggtagagtttgcattggcaaataactttgattta
aaagcagcgtcacttaatgccgaagccgcacagcaaaatgccaaggcgcgcagagcggat
cacgcaccaacgctaactgcaggcgtaagctattcggataaaaccaccgaaataggtagt
gggttcgaaacaaacccagaaaaccaaacccttagccttactttaaaagtgccaatttat
gccggtggcgccactcatgcttcacgtcgccaagccaatgctcaagcgtgggaatcgcgc
gagcttttcaacaaagcgcagcgagatattattcagcaagcacgctctaaccacttggaa
gtaatgaccggcgtggccactgtaaaagcgcgcaagcaggctattacctctagcgagagc
gccctgcgcgcaacgcaagctggctatgaggtaggcacacgcgatttagtcgacgtacta
aacgcacaacgcagcctattccgcgcccgccgcgactactccgacgcactctacgcttac
gtagttaacaccctcaaactaaaacaagtagcgggcacactttctactgcagatatagac
gcattgagtggctggttggatacggcaaaagaagtgcaatattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (7)   
   KEGG PATHWAY (4)   
   KEGG MODULE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (53)   

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