KEGG   Saccharophagus degradans: Sde_0503
Entry
Sde_0503          CDS       T00335                                 
Name
(GenBank) thiamine biosynthesis protein
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
sde  Saccharophagus degradans
Pathway
sde00730  Thiamine metabolism
sde01100  Metabolic pathways
sde01240  Biosynthesis of cofactors
sde04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:sde00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    Sde_0503
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    Sde_0503
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sde03016]
    Sde_0503
Enzymes [BR:sde01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     Sde_0503
Transfer RNA biogenesis [BR:sde03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Sde_0503
SSDB
Motif
Pfam: ThiI THUMP QueC Rhodanese
Other DBs
NCBI-ProteinID: ABD79767
UniProt: Q21NG2
Position
615993..617444
AA seq 483 aa
MRFVVRLFPEISIKSAPVRKRWTKMLTDNLRLMAKRIHPTARVNKEWDRIEVTAKVDDPV
VEGQLIDMLARTPGIANFSHVQTHPFESLHDIYELVQASWGDQLKGKTFCVRVKRTGNHD
FTSTEVERYVGGGLNQNNPTGGVKLKDPDVSIGLEVKDDQVYLVTKKYQGLGGFPMGTQE
SVLSLISGGYDSTVASFQMIKRGLRTHYCFFNLGGREHELAVKEIAFFLWNRFGSTHRVR
FISVPFEGVVGEILQKVGPSNMGVVLKRMMLRAGERIAERGGIEAMVTGEAVAQVSSQTI
PNLSVIDSVTDMMVLRPLIVMDKRDIIDISRKIGAEEFSAAVPEYCGVISVKPSAKVNRA
KLEAEEEKFDFSILEHALENAVVQSIDEVMDDAQELAEVELVSELPVSAKVIDIRHHTEQ
ELRPLTVEGREVLEIPFYQLSTAYAELDKAVNYYLFCDKGVMSGLHARHLLDAGYTNVGV
YRP
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgagatttgttgttcgtttattccctgaaatatccatcaaaagtgcccccgtgcgcaag
cgctggacaaaaatgctaaccgataacttacggttgatggctaagcgtatccatccaacc
gctagggtgaacaaagagtgggatcgtatcgaggtgacggccaaggtggatgaccccgtt
gtggaggggcagttaatcgatatgttggcgcgtacaccgggaattgcgaacttttcccat
gtgcaaacgcacccttttgaatcattgcatgatatttacgagttggtacaagcatcatgg
ggtgaccaacttaagggcaaaaccttttgtgtgcgagtaaagcgcactggcaaccacgat
tttacttctaccgaagtcgagcgctatgtgggtggtggccttaatcaaaataaccccact
ggcggcgtaaaactaaaagaccctgatgtgtctattggtttggaagtaaaagatgatcag
gtgtatttggtaaccaaaaaatatcagggcttaggcggcttccccatggggacgcaggag
tctgtgctatctcttatctctggcggctacgattctaccgttgccagctttcaaatgatc
aagcgcggtttgcgcacccattactgcttttttaatttaggggggcgcgagcacgagcta
gcagttaaagaaatcgcgttctttttatggaatcgattcggttctactcaccgcgtgcgt
tttatctcggtgccgtttgaaggtgttgtaggggaaattctgcaaaaggttggcccttca
aatatgggcgtagtacttaagcgtatgatgttgcgtgcaggtgagcgcattgccgagcgc
ggcggtattgaggcaatggtgaccggcgaggcggtggcgcaggtatcgagccaaaccatt
cccaacttatctgtgattgatagcgttaccgatatgatggtattgcgaccgcttattgtg
atggataaacgcgatattattgatatctcccgcaaaattggcgcagaagagttctctgct
gctgtgcctgagtattgcggtgttatttcggtaaaaccctctgcaaaagtgaatcgtgcc
aagcttgaggcggaagaagaaaagtttgatttttctatcctcgaacacgcgctagaaaac
gcggtagtgcaatctatcgatgaggtgatggatgatgcgcaagagcttgccgaggttgaa
ttggtgtcggaattgcccgtcagtgccaaagttattgatattcgccatcacaccgagcaa
gaactgcgaccccttactgttgaagggcgcgaagtgttggaaatacctttttaccaatta
agcacagcttatgcagagttggataaagccgttaactattatttattttgcgataagggg
gtaatgagcgggctgcatgctcggcatttgctagatgctggctatactaatgtaggtgtt
tatcggccttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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