KEGG   Saccharophagus degradans: Sde_1202
Entry
Sde_1202          CDS       T00335                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54) / transcription elongation factor GreB
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
sde  Saccharophagus degradans
Pathway
sde02024  Quorum sensing
sde03060  Protein export
sde03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sde00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Sde_1202
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Sde_1202
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Sde_1202
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sde02044]
    Sde_1202
Enzymes [BR:sde01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Sde_1202
Secretion system [BR:sde02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Sde_1202
  Eukaryotic Sec-SRP protein
   Sde_1202
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA cobW Zeta_toxin AAA_33 AAA_19 AAA_30 AAA_16 YqeC KTI12 nSTAND3 AAA_31 APS_kinase AAA_14 Thymidylate_kin 6PF2K TsaE ArsA_ATPase
Other DBs
NCBI-ProteinID: ABD80464
UniProt: Q21LG5
Position
1547130..1548617
AA seq 495 aa
MFIGFSGRYCRRFRTKVTINGLKFFTMFENLSDRLSRSFKKITGKARLNHDNIKDALSDV
RKALLEADVALPVVKEFTGQVRKRAQGQEVSRALNPGQQFLKIVESELTQIMGEANEKLN
LAAQPPAVVLMAGLQGAGKTTSVAKLARFLREREKKKVMVVSADVYRPAAIKQLETLATE
VEAEFFPSDAGQNPVDIAKNALAQAKKLHVDVLLVDTAGRLHVDEALMEEIQAIHAAVNP
IETLFVIDAMIGQDAVNTAKAFNDALPLTGVILTKTDGDARGGAALSVRHVTGKPIKFLG
VGEKTEALEPFHPDRLASRILGMGDIMSLIEEAEQKIDKVKAEKLVQKVQKGKSFDLEDL
RDQLQQMQNMGGMASMLDKLPGMGGMAKMAESNGMTSQFKQMQAIIDSMTPAERKNPDVL
NGSRKRRITMGSGTQIQDLNRLLKQHKQMSKMMKKMKGGGMQKMMRGMGGMLPGGGSGGV
PPMGGGGGLPPGFGS
NT seq 1488 nt   +upstreamnt  +downstreamnt
gtgtttatcgggttttctgggcgttattgccgccgctttcgcactaaagtcaccattaac
ggtttaaagtttttcactatgtttgaaaatttatctgatcgtttatcgcgctcctttaaa
aaaattacgggcaaggcgcgacttaatcacgacaatattaaagacgcgttgagcgatgtg
cgcaaagcgctgcttgaggccgatgtggcattgcccgtagtgaaagagttcaccggccaa
gtgcgcaagcgcgctcagggtcaggaggtgtcgcgtgcacttaaccctgggcagcagttt
ctaaaaattgtagaaagtgagcttacccaaattatgggtgaggcgaacgaaaagctaaat
ttagcggctcagccaccggcagtagtgttgatggctggtttgcagggtgcgggtaaaaca
acctccgttgctaagcttgcgcgctttttgcgtgagcgagaaaagaaaaaagtaatggtg
gtgagtgcggatgtttaccgcccagcagctattaagcagctagaaacccttgctacagaa
gttgaagccgagtttttcccttccgatgcagggcaaaaccctgtcgatattgccaaaaat
gcgttggcacaagctaaaaagctgcatgtagatgtattgttagtggataccgctggccgt
ttgcacgtagatgaggcgttgatggaagagattcaggccattcatgcggcggtgaatcca
attgaaacgctgttcgttattgatgccatgatcggtcaggatgcggtgaacaccgctaag
gcgtttaatgatgccttaccactcacgggtgtaatcttaaccaaaaccgatggtgatgca
cgcggtggtgctgcgttatcggtgcgccatgtaacaggtaagcctattaagtttttgggt
gtgggtgaaaaaaccgaggctttagagccgttccaccccgaccgtctagcttcccgcatc
cttgggatgggcgacattatgtcgcttatcgaagaggcggagcaaaaaatagataaggtt
aaggccgaaaagttagtccaaaaagtccagaagggtaagtcgtttgacttggaagatctg
cgcgatcagcttcagcaaatgcagaatatgggcggcatggcctctatgttagataagttg
cccggtatgggcggcatggccaaaatggccgaaagtaatggaatgacaagtcagttcaag
cagatgcaggcaattatcgattcgatgacacctgctgagcgaaaaaatcccgatgtgctt
aacggttcgcgcaagcgccgtatcactatggggtctggcacacaaattcaagatctgaat
cgtttgctcaaacagcacaagcagatgagcaaaatgatgaagaaaatgaagggcggcggc
atgcaaaaaatgatgcgcggcatgggtggtatgcttccaggtggcggctctggaggtgta
cctccaatgggcggcggcggtggtttgcctcctggttttggttcttaa

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