KEGG   Saccharophagus degradans: Sde_2551
Entry
Sde_2551          CDS       T00335                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
sde  Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:sde00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sde03009]
    Sde_2551
Enzymes [BR:sde01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     Sde_2551
Ribosome biogenesis [BR:sde03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Sde_2551
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ABD81811
UniProt: Q21HL8
Position
complement(3236245..3237210)
AA seq 321 aa
MSISAALTARVPQEMAGNRLDQVCADLFPDYSRSRIQQWIKSGKLLVDDKTGKAKQKVFG
GENLVLEPELQEEGEWLPEPINLNIVYEDEHILVINKQAGLVVHPAAGNWSGTLLNGLLH
HVPSLVNVPRAGIVHRLDKDTTGLMVVAKSLPTQTHLVAQLQARTVSRHYQAVVHGTFAA
KDKLGTVDIAIGRHPTQRVKMAALENSGKPAVTHYRVVKDLQGFAHVHLQLETGRTHQIR
VHMAHIGYPLVGDQVYGKKVPTKVRNHNPGAVHAEAFPRQALHAWRLSLVHPVTEETVFW
EADLPEDMVQLIDQLAEGEGD
NT seq 966 nt   +upstreamnt  +downstreamnt
atgtcgataagtgcagccctaacagcccgagtacctcaagaaatggcgggtaatcgcttg
gatcaggtttgtgccgatttgttccctgattactcccgttcacgcatccagcaatggata
aaaagtggaaaattactggttgacgataaaaccggtaaggccaaacaaaaggtgtttggt
ggcgaaaacttggttctcgagcccgaattgcaagaagagggcgagtggctgcccgagcca
ataaacttaaatattgtgtacgaagatgagcatattcttgtaataaacaagcaagccggc
ttagttgtgcaccctgctgcaggtaattggtctggaaccctactaaatggcttgttacac
cacgtgccaagccttgtgaatgtgccgcgcgcgggcatagtgcaccgcttagataaagac
accacgggcttaatggtagtagccaagtcattgcccacccaaacccaccttgtggcgcaa
ttgcaggcccgaacggtatcgaggcattaccaagctgtagtgcatggcacttttgcagca
aaagataagctgggaacggtagacattgccataggcaggcacccaactcagcgggtaaaa
atggcggcattagaaaacagcggcaagcctgcggttacccattatcgcgtagtaaaagat
ctacaagggtttgcccatgtgcatttacagctagaaaccggccgcacccatcaaataagg
gtacatatggcccacattggttacccgttggttggggatcaggtatacggtaaaaaagtc
cctacaaaggtgcgcaatcacaaccctggtgctgtgcatgccgaagccttccctcgccaa
gctctacacgcttggcgattaagtttggttcaccctgtaaccgaagaaacggttttttgg
gaggcggatttaccagaagatatggtgcaactcattgatcagcttgcggagggcgagggt
gattga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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