KEGG   Shewanella denitrificans: Sden_2280
Entry
Sden_2280         CDS       T00344                                 
Name
(GenBank) arginine decarboxylase
  KO
K01585  arginine decarboxylase [EC:4.1.1.19]
Organism
sdn  Shewanella denitrificans
Pathway
sdn00330  Arginine and proline metabolism
sdn01100  Metabolic pathways
sdn01110  Biosynthesis of secondary metabolites
Module
sdn_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:sdn00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    Sden_2280
Enzymes [BR:sdn01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.19  arginine decarboxylase
     Sden_2280
SSDB
Motif
Pfam: Orn_Arg_deC_N Arg_decarb_HB Arg_decarbox_C
Other DBs
NCBI-ProteinID: ABE55560
UniProt: Q12LW6
Position
complement(2703707..2705617)
AA seq 636 aa
MNDWTIEDARAGYNVTHWSQGFYGIGEAGEVTVSPDPLNPSNKVALDTLAQDLVQAGIAL
PVLVRFPQILHHRVESLCDAFNQAIQKYEYQNDYLLVYPIKVNQQKTVVEEILASQVSKE
VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDKEYVRLALIGEKLGHKVYIVLEKMS
ELKMVLEEARELGVTPRLGLRTRLAFQGKGKWQASGGEKSKFGLSAAQVLKVVDELKEAN
MLESLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRQLGASINCFDVGGGLAVDYDGTR
SQSNNSMNYGLTEYANNIVNVLTDLCNEYEQPMPRIISESGRHLTAHHAVLITDVIGTEA
YMPENIQAPAEDAPQLLHNMWQSWTEISGRHDQRAIIEIYHDSQSDIAEAHSLFAVGQLS
LMDRAWAEQTNLRVCHEVKGLLSNNNRYHRPVIDELNEKLADKLFVNFSLFQSLPDAWGI
DQVFPVLPLTCLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPVPAWDPANPYLIG
FFMVGAYQEILGDMHNLFGDTNSAVVFVEDNGKARIESTLDGDTVADVLRYVNLDADEFM
HTYEELVEQHIVEDERASILEELQLGLKGYTYLEDF
NT seq 1911 nt   +upstreamnt  +downstreamnt
atgaatgattggacaatcgaagatgcccgcgcaggctacaatgtgactcattggagccaa
ggcttttacggtatcggtgaagctggcgaggtgacagtatcgcccgatccattaaaccca
tccaacaaggtcgccttagatacactggcacaagatttggtccaagcaggtattgcctta
cctgtattagtgcgtttcccgcaaattttgcaccacagagtcgaaagcctgtgtgatgca
tttaaccaggccattcaaaaatacgagtatcaaaacgattacttattggtgtaccccatc
aaggtaaaccaacagaaaacggtagttgaagaaattctagccagccaagtctctaaagaa
gtacctcagctgggtttagaagcaggcagtaagcctgaattgatggcggtactcgccatg
gcacaaaaagccagctcagtaatcgtctgtaatggttacaaagataaagaatacgttcgt
ttagccttaattggtgaaaagctaggccataaagtttacatcgtacttgagaagatgtct
gagcttaaaatggtgcttgaagaagcccgtgagcttggcgtcactccccgtcttggttta
cgcacccgtcttgcattccaaggcaaaggtaaatggcaagccagtggcggcgaaaaatct
aagtttggcctttctgcagcccaagtgcttaaagtagttgatgagctgaaagaagccaac
atgttggagtctttacagttattgcatttccacttaggttctcaaattgccaacattcgt
gatattcgccaaggtgtgagtgaagcgggccgtttctattgtgagttacgtcaactgggt
gccagcattaactgtttcgatgtcggcggcggcttagcggttgactatgatggcactcgc
agtcaaagcaataactcgatgaactacggtttaaccgagtacgccaataatatcgttaac
gtgttaacggatttgtgtaacgaatacgagcagccaatgccacgtattatttctgaatct
ggtcgtcacttgactgcgcaccacgcagtgttaatcactgacgtgattggcactgaagcc
tatatgcctgaaaatattcaagcaccagccgaagatgcgccgcaactattacataacatg
tggcagtcttggacagagatcagcggtcgtcacgatcaacgtgcaattattgaaatttat
cacgatagccaaagcgatatcgccgaagcgcattctttgtttgccgtcgggcaattaagc
ctgatggatagagcctgggctgagcaaaccaacttacgtgtctgtcatgaagtaaaaggt
ttgctaagcaataacaaccgttaccacagaccggtgattgatgaattaaacgaaaaatta
gctgacaagctattcgttaacttctcattattccagtcattgccagatgcatggggtatc
gaccaagtattcccagtattgccactgacttgccttgataaagcgccagagcgccgtgca
gtaatgctagatatcacttgtgactccgacggtattgtcgatcaatacgtagatggtcaa
ggtatcgagacgacattgccagtacccgcatgggatcctgctaacccgtacctgattggc
ttcttcatggtgggtgcataccaagaaatcttgggcgacatgcataacctctttggtgac
actaattcggctgtggtatttgttgaagataacggtaaagcacgaattgagtcgacgtta
gacggtgacactgtggctgacgttctgcgttacgttaacttagatgctgatgagtttatg
catacctatgaagaattagttgaacagcacattgttgaagacgaacgtgcttcaatttta
gaagagttacaacttggacttaaaggttacacttacttagaagatttctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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