KEGG   Shewanella denitrificans: Sden_2570
Entry
Sden_2570         CDS       T00344                                 
Name
(GenBank) farnesyl-diphosphate synthase
  KO
K00795  farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
Organism
sdn  Shewanella denitrificans
Pathway
sdn00900  Terpenoid backbone biosynthesis
sdn01100  Metabolic pathways
sdn01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:sdn00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    Sden_2570
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:sdn01006]
    Sden_2570
Enzymes [BR:sdn01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     Sden_2570
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     Sden_2570
Prenyltransferases [BR:sdn01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   Sden_2570
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-ProteinID: ABE55849
UniProt: Q12L27
Position
3074551..3075432
AA seq 293 aa
MLAQAIELYQQRVDIVLKNKLEQLDDCAPELKDAMTYGALMGGKRIRPFLVYAIGQMLKV
PLEKLDNAAAAIECIHAYSLIHDDLPAMDDDDLRRGKPTVHIAFNEAQAILAGDALQSLA
FELMTESQADTSPTQQLHMVKVLAKAAGYQGMCGGQAIDLAATNKAIDLAQLTQLHNKKT
GALISCAVELAIILADASPVERAHLAQFSHALGLAFQVQDDILDVTVSTQELGKPQGSDE
QANKSTFPKLLGLAAAQAQATELVQQALSALEELPYNTQLIADFARYIITRRL
NT seq 882 nt   +upstreamnt  +downstreamnt
gtgttagcccaagcgattgaactatatcagcaaagagtcgatatcgtactcaagaataag
ctcgagcaacttgacgactgcgcccctgaattgaaagatgccatgacctacggcgccctc
atgggtggcaaacgtatcaggccttttttggtttatgccataggtcaaatgctcaaggtc
ccgcttgaaaaactggacaatgccgccgccgccatcgaatgcattcacgcctattcactt
atccatgatgatttacccgccatggatgatgatgatttaaggcgcggtaaaccaaccgta
catattgcgttcaatgaagctcaagccattcttgctggcgatgcgctgcaatcactggcc
tttgagctcatgacagagagtcaagcagacactagccctactcaacaactgcacatggtt
aaagtcttagccaaggccgcgggctatcaaggcatgtgcggcgggcaagccatagattta
gccgccaccaataaagccatagatttagcccaactcacccaactgcataataaaaaaaca
ggcgcgttaataagctgcgccgtggagttggccattattctagccgatgcaagtcctgtg
gaacgagctcatctagcccagttttcccatgccttagggttagcatttcaagtacaagat
gacattttagatgtcactgtatcgactcaagaattaggcaagccccaaggcagcgatgag
caagccaataaaagcacctttcctaaattattaggattagccgcagcgcaagctcaggcg
acagaacttgtccaacaggcactatcagcgctggaagaattaccttacaatacccagtta
attgcagacttcgccagatacatcattacgcgaagattataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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