KEGG   Sulfitobacter donghicola: SD1155_07965
Entry
SD1155_07965      CDS       T05893                                 
Name
(GenBank) excinuclease ABC subunit UvrC
  KO
K03703  excinuclease ABC subunit C
Organism
sdo  Sulfitobacter donghicola
Pathway
sdo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sdo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SD1155_07965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdo03400]
    SD1155_07965
DNA repair and recombination proteins [BR:sdo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SD1155_07965
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH_5 GIY_YIG_2 HHH_2 5_3_exonuc GIY_YIG_domain MciZ
Other DBs
NCBI-ProteinID: QAV31509
Position
1636195..1637979
AA seq 594 aa
METYQEKIKTKLNVVPLEPGCYLMKDRNDQVIYVGKAKKLRNRLRSYFTGAHDAKTTRLV
SEIRNFEFIVTSSETESLLLELNLIKQYQPRYNILLKDDKSYPFIKITKEKHPRLIVTRT
VKKGTGKYFGPYPNAYSAQETKKLLDRIYPFRKCDKMPDKLCLYYHIGQCMGPCVYDVDL
DKYAQMTKEISDFLHGEDKTILNHLQERMEKASESLDFERAKEYRDLIQHIHNLTKKQKI
MSTDNTIRDVFGYSVSKGWMCIQVFFIRQGNMIKRDTTMIPIQQTEEEEFYTFIGQFYSL
NQHILPKEVHVPKHLDKDIIQSVVDTKIVQPSRGAKKEMIDLANHNAEVSLNNKFELIAR
DESRTVKAIEELGERMGIQTPIRIEAFDNSNIQGVDPVSAMVTFVDGKPDKKGYRKYKIK
TVEGPDDYKSMREVVRRRYTRVLNEGTPLPDLIIVDGGKGHMNGVMDVLENELGLDIPVA
GLQKNDKHQTSELLYGASAEIVPLKKNSQAFYLLHRIQDEVHRFAITFHRQTRQKTGLKS
VLDDIEGIGAKRKTKLLRTFGSIKKMKEASLEELKKSGLPEHVAKNLQHALQDK
NT seq 1785 nt   +upstreamnt  +downstreamnt
atggaaacgtatcaagaaaaaattaaaacaaaactaaatgtagtgccattagagccaggt
tgctatttaatgaaagatcgcaatgatcaagtgatttatgtcggcaaagcgaaaaaacta
cgtaatcgattacgttcttattttacgggtgcgcatgatgctaaaacaactcgattagta
agtgaaattcgtaattttgagtttatagtgacatccagtgaaactgaatccttactttta
gaattaaacttaattaaacaataccaaccacgttataacattttattaaaagatgataaa
agttatcctttcatcaaaattactaaagaaaagcatccaagattaattgtaacgagaacc
gttaaaaaagggactggcaaatattttggtccatatcctaatgcttattccgcacaagaa
acaaaaaaattgttagatcgtatttatccatttagaaaatgtgataaaatgccagacaaa
ttatgtctatattatcatattggtcaatgtatggggccatgtgtgtatgatgtcgattta
gataaatatgcacaaatgacaaaagaaattagtgacttcctacatggtgaggacaaaacg
atattgaaccatttacaagaacgtatggaaaaagcgagtgagtctcttgatttcgaacgt
gcaaaagagtaccgtgatttaatccaacatattcataatctcactaaaaaacaaaaaatt
atgtcaacagataatacgattcgagatgtctttggttatagcgtgtcaaaaggttggatg
tgtattcaagtctttttcattagacaagggaatatgattaaaagagacactacgatgatt
ccaatccaacaaaccgaagaagaagaattttatacttttatcggtcaattttatagttta
aaccaacatattttaccgaaagaagtacatgttccgaaacatttagataaagacatcata
caatcagttgtagatactaaaattgttcaaccatctcgtggggcgaaaaaagaaatgatt
gatttggcaaatcataatgcagaagtttcgctcaataataagtttgaattgattgctaga
gatgaatctagaacagtcaaagcaatagaagaacttggtgaaagaatgggtattcagacg
ccaattagaatcgaagcattcgataattcaaatatacaaggtgtggatcctgtatctgcc
atggtaacttttgttgatggtaaaccagataaaaagggatatcgtaaatataaaattaaa
acagttgaaggtcctgacgactataaatcaatgcgagaagttgttcgacgtcgatataca
cgtgtactaaacgaaggtacacctttacctgatctcatcattgtcgatggtggtaaaggg
catatgaatggcgtgatggatgttcttgaaaatgaattaggcttagacataccagtggct
ggattacaaaaaaacgataaacaccaaacgtccgagttattatatggtgcaagtgctgaa
atcgtaccattaaagaaaaatagccaagccttttatttacttcatcgaattcaagatgaa
gtacatcgatttgctattacgttccatagacagacaagacagaaaacaggacttaaatct
gtacttgatgatattgagggcattggagcaaaacgtaaaacgaaattattaagaacattt
ggttcaattaagaaaatgaaagaggcatcattagaagaattaaaaaaatctggactgccg
gaacatgtcgcaaaaaacttacaacacgcacttcaagacaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (9)   
   Pfam (9)   
All databases (15)   

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