KEGG   Staphylococcus delphini: NCTC12225_00905
Entry
NCTC12225_00905   CDS       T06587                                 
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
sdp  Staphylococcus delphini
Pathway
sdp03420  Nucleotide excision repair
sdp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sdp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NCTC12225_00905 (pcrA)
   03430 Mismatch repair
    NCTC12225_00905 (pcrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdp03400]
    NCTC12225_00905 (pcrA)
Enzymes [BR:sdp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NCTC12225_00905 (pcrA)
DNA repair and recombination proteins [BR:sdp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NCTC12225_00905 (pcrA)
   MMR (mismatch excision repair)
    Other MMR factors
     NCTC12225_00905 (pcrA)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 Viral_helicase1 AAA_30 AAA_11 ResIII DEAD
Other DBs
NCBI-ProteinID: VED62330
Position
1:963610..965805
AA seq 731 aa
MNPLVANMNKEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNILAITF
TNKAAKEMKERVQALVGEEAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV
IKDVLKRENIDPKKYEPKIFIGEISKLKNDLLTPAKAEAEADDFYSRMVATVYKGYQQQL
VRNQALDFDDLIMTTIRLFERVPDVLDFYQNKFQYIHVDEYQDTNTAQYTLVNMLAQKFK
NLCVVGDSDQSIYGWRGANIHNILSFEKDYPNARTIFLEQNYRSTKTILQAANEVIRHNT
ERKPKGLWTANQQGEKIHYYEAMSERDETEYVVREIFKQQKKGKRYKDMAVLYRTNAQSR
VLEETFLKSTIPYVMVGGQKFYDRKEIKDLLSYLRLIANSADDISLQRIINVPKRGIGPS
SVEKIATYAADHELTMFDALAEVDFIGLSKKVTQAAAEFYQLMSNLMQEQEFLEVSEIVD
EVLKKSGYREMLKREQSIESRSRLENIDEFMSVPVDYEKNTPLEEQSLINFLTDLSLVAD
VDEANLEDGVTLMTMHSAKGLEFPIVFIIGMEESIFPHIRAIQSENDHEMEEERRISYVA
ITRAEEELYLSHATSRTLFGRPQSNARSRFLNEIPEELLDLPERQHATTIGSKKRQSAKR
GFSQRVVKNSTSSSTASNWKVGDKVMHKSWGEGMVSNVNDKNGSIELDIIFKSEGPKRLL
AQFAPIEKKED
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgaatccactcgttgcaaatatgaataaagaacagagtgaagcggtgcgtacgactgag
ggaccgcttttaattatggcaggtgcaggttctggtaaaacgagagtactcacgcatcga
attgcctatttattagatgaaaaagatgtatctccatacaatatattagcgattactttt
acaaataaagcggcaaaggaaatgaaagaacgtgtgcaagcactagtaggtgaagaggca
gaagtgatttggatgtcaacattccactctatgtgtgtgcgcattttacgacgtgacgcc
gatcgaattggtattgaacgcaactttactattatcgatccaaccgaccaaaagtcagtc
attaaagatgttttaaaacgagaaaatatcgacccgaaaaagtatgaaccgaaaattttt
attggagaaattagtaaacttaaaaacgatttattgacacctgccaaagctgaggcagaa
gcagatgatttttattcacgcatggtcgctacggtatacaagggctatcaacaacaactc
gttcgtaaccaagcattagatttcgatgatttgattatgacgacgattcgattgtttgaa
cgtgtgccggacgtgttagatttttatcaaaacaaattccaatatatccatgtagatgaa
tatcaagatacgaacacagcgcaatatacattggtgaatatgttagcgcaaaagtttaaa
aacctatgtgttgtaggggattcagaccagtctatttacggttggcgtggcgcaaacatt
cacaacattttatcgtttgaaaaagattatccgaatgcgcgtaccatctttttagagcaa
aactatcgttcgacaaagacgattttacaagcggctaacgaggtcattcgtcataatact
gaacgtaaacctaaaggactatggacagcaaaccaacaaggtgaaaaaattcattattat
gaagcgatgagtgagcgtgatgaaactgagtatgtcgtgagagaaatttttaaacagcaa
aaaaagggtaaacgttataaagatatggcggtactgtatcgaacaaacgcccaatcacgt
gtgctcgaggaaacatttttgaaatccactattccttatgtcatggtcggcgggcaaaag
ttctatgatcgtaaagagattaaagacttactcagctatttgcgtttaattgcgaatagt
gctgatgatatcagtctacagcgtattattaacgtgccaaagcgtggtataggaccgtct
tcagttgaaaaaatagcaacctatgctgcagatcatgaattgacgatgtttgatgcattg
gcagaagtcgactttatcgggttatcaaaaaaggtaacacaagcggcggcagaattttat
caattgatgtcaaacttaatgcaagaacaagaatttctagaggtttcagaaattgttgat
gaagtactcaaaaaatcagggtatcgtgaaatgttaaaacgtgaacaatcaatagaatca
cgcagccgtttagaaaatattgatgaatttatgtccgtacctgtcgattatgaaaagaat
acccctttagaggagcagtcgctaattaatttcttaacggatttatcattagtagcggat
gtcgatgaagcgaacttagaagatggtgtgacgttaatgacgatgcactcagcaaaaggg
ctagagtttccaattgtgtttattatcggtatggaagaatccattttcccacacattcgc
gcaattcaaagtgagaatgaccacgaaatggaagaagaacgacgtattagttatgtggcc
attacgcgtgctgaagaagagctttacttatcacatgcgacatcacgtacgctgtttggt
cgtccgcaaagcaatgcgcgttctcgtttcttaaatgaaattccagaagaactacttgat
ttaccagaacgtcaacacgccacgacgattggttcgaaaaaacgacaatcggcgaaacgt
ggctttagtcaacgtgtcgtgaagaattcaacttcatcatcaacagcgtcaaattggaaa
gtcggcgataaggtaatgcataaatcatggggtgaaggcatggtttcgaacgttaatgat
aaaaatggctcaatcgaattagatattattttcaaatctgaaggacctaaacgtttactt
gctcaatttgcgcctattgaaaagaaggaggattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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