KEGG   Sulfuricella denitrificans: SCD_n02221
Entry
SCD_n02221        CDS       T02857                                 
Name
(GenBank) poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
sdr  Sulfuricella denitrificans
Pathway
sdr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sdr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SCD_n02221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdr03019]
    SCD_n02221
Enzymes [BR:sdr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     SCD_n02221
Messenger RNA biogenesis [BR:sdr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     SCD_n02221
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd DUF2204
Other DBs
NCBI-ProteinID: BAN36029
UniProt: S6AMJ3
Position
complement(2250026..2251399)
AA seq 457 aa
MIRKLISRVFQKKSPKNGEPRIFKLKSHGITADQLTPCALKTVKALQQAGFKAFVVGGAV
RDLLLGREPKDFDVATDADPDEVRHLFRRSRIIGRRFRIVHVMCGPETIEVSTFRTVAVA
TNNDSDDRQTDQQSGRILRDNVFGSQVEDAMRRDFTINALYYDPVSQEIWDYHNGVADLK
AGVMRIIGDPAQRYREDPVRMLRAVRFAAKLGLKLDPAAIKPIRELAELLEDVPAARLFD
EMLKLLFSGHAVQSILLLRKKGLHHGLLPMLDVILEQPMGERFVMLALAKTDQRIEEGKP
VSPAYLFAALLWHEVLVAWQQSQAEGEKPVPALHLAMDVVLAAQSEKLAIPHRYDAVMKE
IWTMQPRFLQRAGQRPFRLLEHPRFRAAYDFLMMRCESGEVDAEVGRWWDDFQDAGDHKR
GEMLIKDEAPAAKKRRRRRKPKAAGEAGEVSIAEPQD
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgatccgtaaacttatcagccgcgttttccagaaaaaatcaccaaaaaatggtgagcca
cgcatctttaaactgaaatctcacggcatcaccgccgaccagctcactccgtgtgcgctg
aagacggtgaaggcgctgcagcaggcaggcttcaaggccttcgttgtgggtggcgcggtg
cgtgacctgctactgggcagggaacccaaggatttcgacgtagccaccgatgccgatccg
gacgaagtgcgtcatctgttccggcgttcccgcatcatcgggcggcgcttccgcatcgtc
catgtgatgtgcggacccgaaaccatcgaggtgtccacctttcgcaccgtcgctgtcgcc
accaacaacgacagcgatgatcgccagaccgatcagcaaagtgggcgcatcctgcgcgac
aacgtattcggttcccaggtggaggacgcgatgcgccgcgattttacgatcaacgcgctg
tattacgaccccgtaagccaggaaatctgggattaccacaatggcgtggccgatctcaaa
gccggggtgatgcgcatcatcggcgacccggcccagcgttaccgcgaggacccggtgcgg
atgctgcgcgccgtgcgttttgccgccaaactcgggctgaaactggacccggcggcgatc
aagccgatccgggaactggccgagttgctggaggatgttccagcggcgcggctgttcgac
gaaatgctcaagctgcttttttctggtcatgcggtacaaagtatcctgctgctgcgcaag
aagggtctgcatcatggcttattgccgatgctggacgtgatcctggagcagccgatgggc
gaacgcttcgtcatgctggcgctggccaaaaccgaccagcgcatcgaggaagggaagccg
gtttcgcctgcctatctgttcgcggctctgctctggcatgaagtgctggttgcctggcag
caatcccaggctgaaggggaaaagccggttccggcactgcacctggcgatggatgtggtg
ttggcggcgcagagcgagaaactggcgatcccccaccgttacgatgcggtgatgaaggaa
atctggactatgcagccgcgcttcctgcagcgcgccggccagcgtccgtttcgcctgctc
gaacacccgcgctttcgcgccgcgtacgatttcctgatgatgcgttgcgagagtggcgag
gtcgatgccgaggttggccgctggtgggatgattttcaggacgctggtgatcacaaacgc
ggcgagatgctgatcaaggacgaagcccccgctgccaagaagcgacggcgccgtcgcaag
cccaaggctgccggagaggcaggagaagtatcaatcgctgagccgcaggactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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