KEGG T02008: SPSE

Staphylococcus pseudintermedius ED99: SPSE_1979

Entry

SPSE_1979         CDS       T02008

Symbol

uvrA

Name

(GenBank) excinuclease ABC subunit A

K03701

excinuclease ABC subunit A

Organism

sdt Staphylococcus pseudintermedius ED99

Pathway

sdt03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:sdt00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SPSE_1979 (uvrA)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdt03400]
    SPSE_1979 (uvrA)
DNA repair and recombination proteins [BR:sdt03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SPSE_1979 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SPSE_1979 (uvrA)

SSDB

Motif

Pfam:

UvrA_DNA-bind UvrA_inter ABC_tran SMC_N nSTAND1 AAA_29 AAA_16 AAA_21 AAA_23 RsgA_GTPase DnaJ_CXXCXGXG AAA_33 BCA_ABC_TP_C nSTAND3 ATPase_2 Viral_helicase1 cobW

Other DBs

NCBI-ProteinID:

ADX77224

Position

complement(2033722..2036565)

AA seq 947 aa
MEEPSIVVKGARAHNLKNVDIELPKNQLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARIGKP
FCPNHGIEIESQTVQQMVDRIMELEERTKIQLLAPVVNHRKGTHEKLLTDISKKGYVRVR
VDGEIMDVTQVPELDKNKNHTIEIVVDRLVVKPGIETRLADSIETVLELADGRLVVDIID
GDKLEFSEKHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQKLTVDLDLVVPDKDKT
LNEGAILPWEPTSSDFYPSMLKRVCEVYKINMDKPFKKLTERQRNIILYGSGDKEIEFTF
KSKFGQERKRTMPFEGVVPNIERRYHESPSEYVREMMQKYMGEQVCETCHGQRLSREALS
VYVAGKNVGEVVEQSIKEALTYYENIELTEQDAQIAHLILKEITSRLAFLNNVGLDYLTL
NRSSGTLSGGEAQRIRLATQIGSRLSGVLYVLDEPSIGLHQRDNDRLIHTLQEMRDLGNT
LIVVEHDEDTMIAADYLVDIGPGAGEHGGEVVASGTPKQVMRNAKSLTGQYLSGKKFIPV
PEHRRPVTDRKISVKGARSNNLKNVDVDFPLSVMNVVTGVSGSGKSSLVNEVLYKSLAKA
INKSKIKPGEHDEITGMDQIDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDVFASTNEAK
VRGYQKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKG
KNIADVLEMTVEDATQFFENIPKIKRKLQTLVDVGLGYITLGQPATTLSGGEAQRVKLAS
ELHKRATGRSIYILDEPTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADNLI
DLGPEGGDGGGTILATGTPEEIAAIPESYTGRYLKTVLARDKERMEG

NT seq 2844 nt +upstreamnt +downstreamnt
atggaagaaccatcaatcgtagtgaaaggggcccgtgcccacaatttaaaaaatgttgat
atcgaattgccaaaaaatcagttaattgtcatgacaggactgtcaggatcggggaagtcc
tcgctcgcatttgatacgatttatgctgaagggcaacgtcgatatgtggagtctttaagc
gcatatgctcgtcagtttttagggcaaatggataaaccagacgtagatacaattgaaggt
ttatctccagcgatatcgattgatcaaaagacaacgagtaaaaacccacgttcaacggtg
gcgactgtaacagaaatttacgattatattcgtctcctttatgcgcgtatcggaaagcct
ttttgtcccaatcatggtatcgaaatcgaatcacaaaccgtacaacaaatggttgatcgt
attatggaattggaagaacgtacgaaaatccaactattagcacctgttgtgaaccatcgt
aaagggacgcatgaaaaattattaacggacattagtaaaaaaggttatgtacgtgtgcgt
gttgacggtgaaattatggacgtgacacaagtaccggaacttgataaaaataaaaaccac
acgattgaaatcgtcgtggaccgtttagtcgtgaaaccgggtattgaaacacgtttagca
gattccatcgagaccgtacttgaattagcagacggtcgactcgtcgtggacattattgat
ggagataagctagagttttcagaaaagcatgcatgtccaatttgtggcttttcaatcggt
gaattagagccgagaatgttcagttttaatagtccgtttggcgcgtgtccaacgtgtgat
ggtttagggcaaaagctaactgtagacttggatttagtcgttccagataaagataaaacg
ctgaatgaaggcgcgattttaccgtgggagccgacaagttcggacttttatccatcgatg
ttaaaacgtgtatgtgaagtatacaaaatcaatatggacaaaccatttaaaaaattaact
gaacgccaaagaaacatcattttatacggttctggggacaaagaaattgagtttacattc
aagtcgaaattcggtcaagagcgtaaacgtacgatgccgtttgaaggggtggtcccgaat
attgagcgccgttaccatgaatcaccttcagaatatgtacgtgaaatgatgcaaaaatat
atgggtgaacaagtgtgtgagacgtgtcatggccaacgattgagtcgcgaagcattgtcg
gtgtacgtggcaggtaaaaatgtcggcgaagtggtggaacaatccattaaagaagctttg
acatattacgaaaatattgagctaactgaacaagacgcacaaattgctcatttaatttta
aaagagattacgtcgcggttagcttttttaaataacgttggactcgattatttaacgctg
aaccgttcatctggcacattgtcaggtggggaagcgcaacgtattcgactcgcaacacaa
atcggttctcgtttgtcaggtgtcttgtacgtgctagatgagccatctattggtttacat
caacgtgacaacgatcgtttgattcatacattacaagaaatgcgtgatcttggaaacaca
ttaattgtggttgaacacgatgaagacacgatgattgcggcagactaccttgttgatatt
ggcccaggtgcaggtgagcacggcggtgaagtcgttgcgagcggtacgccgaaacaagtg
atgcgtaacgccaaatcactcactggtcaatatttaagtggtaaaaagttcattcccgtt
ccggaacatcgtcgtccagtgactgaccgtaaaatttcagtcaaaggtgcgcgcagtaat
aacctcaaaaatgtcgacgttgattttccgctctctgtcatgaatgttgtgacaggtgta
tcaggttcaggaaaaagttcgctcgtgaatgaagtgttgtacaaatcattggctaaagcg
attaataaatcaaaaatcaaacctggtgaacatgacgaaattacaggtatggatcaaatc
gataaaattattgatatcgatcagtcgcctattggaagaacaccgcgttctaatccagcc
acatatacaggcgtatttgatgatattcgagacgtctttgcctcaacgaacgaagcaaaa
gtacgtggttatcaaaaagggcgttttagttttaacgttaaaggtggccgttgtgaagca
tgtaaaggtgatggtattataaaaatagagatgcattttctgcctgatgtgtatgtgcct
tgtgaagtatgtcatggcaaacgttacaatcgtgagacgttggaagtcacttataaagga
aaaaatattgctgacgtgttagagatgactgtagaagacgcaactcaattttttgaaaac
attcctaaaatcaaacgcaaattacaaactttagtcgatgttggattaggttatattacg
cttgggcaacctgcaacgacactttcaggtggagaagcgcaacgtgttaaacttgcctca
gaattacacaaacgagcaacaggacgctcaatctatattctcgatgaaccgacaacaggt
ttacatgtcgatgatattagtcgattgttaaaagtgctcaatcgacttgttgaaaatggt
gataccgttgtaatcatcgaacataatttagatgtcattaaaacagcagataacttaatt
gatttaggccctgaaggtggtgacggtggcggtacgattcttgcgacagggacacctgaa
gaaattgccgctatcccagaatcttatacgggtcgttatcttaaaactgtattagcgcgt
gataaggaacgaatggagggctaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (24)   

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