KEGG   Seriola dumerili (greater amberjack): 111216689Help
Entry
111216689         CDS       T05606                                 

Gene name
pin1
Definition
(RefSeq) peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
  KO
K09578  peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    111216689 (pin1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sdu03021]
    111216689 (pin1)
   03110 Chaperones and folding catalysts [BR:sdu03110]
    111216689 (pin1)
Enzymes [BR:sdu01000]
 5. Isomerases
  5.2  cis-trans-Isomerases
   5.2.1  cis-trans Isomerases (only sub-subclass identified to date)
    5.2.1.8  peptidylprolyl isomerase
     111216689 (pin1)
Transcription machinery [BR:sdu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     111216689 (pin1)
Chaperones and folding catalysts [BR:sdu03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Parvulin
    111216689 (pin1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Rotamase_3 Rotamase WW Rotamase_2 X8
Motif
Other DBs
NCBI-GeneID: 111216689
NCBI-ProteinID: XP_022594026
Position
Unknown
AA seq 155 aa AA seqDB search
MSDEENLPSGWEKRMSRSSGKVYYFNHITNASQWERPVGDGRGEPDKVRCSHLLVKHNQS
RRPSSWREQNITRTKDEALELIQKYIDQIKSGEKFDYLASQFSDCSSAKNGGDLGLFGRG
QMQKPFEDASFALKVGDMSGPVFTDSGVHIILRTG
NT seq 468 nt NT seq  +upstreamnt  +downstreamnt
atgtcagacgaggagaatctaccatccggatgggagaaaagaatgagccgcagttcaggc
aaggtgtactacttcaaccacatcaccaatgccagtcagtgggaacgtccggtgggagat
ggccgtggagaaccagataaggtacgctgctctcacctcctggtgaagcataatcagtca
cgtcgtccatcttcctggcgggaacaaaatatcacaagaactaaagacgaggccctggaa
ctaattcagaagtacatagaccagatcaagtctggagaaaagtttgattatctggcttct
cagtttagcgactgcagctcagctaagaacggtggagatctggggctctttggcagaggt
caaatgcagaagccttttgaagatgcctcatttgctcttaaagtgggagacatgagcggt
cctgtttttactgactctggggtccacatcatcctacgcactggctga

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