KEGG   Seriola dumerili (greater amberjack): 111219446
Entry
111219446         CDS       T05606                                 
Symbol
tsen2
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
sdu  Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sdu03016]
    111219446 (tsen2)
Enzymes [BR:sdu01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     111219446 (tsen2)
Transfer RNA biogenesis [BR:sdu03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    111219446 (tsen2)
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N Cwf_Cwc_15
Other DBs
NCBI-GeneID: 111219446
NCBI-ProteinID: XP_022597844
Position
Unknown
AA seq 422 aa
MQAEFRAPRRRTRVHEEYQAPLPVSSSPDERTDLRAELINQHVLVCHPDHIQKIHNQGYF
GKGILSRARPDHSISDQWEQHKGLFLPVISQSRYEELRCWAGAALSAQGLDDEAVSQILL
THSRPVEMEDLRREVGEGENGHRCEEGEEKGPGPEDGVCPHTKRPKPRLDVEPEAKRSCR
LDPEDLNHDHSSDQDSDSNPDPDPVSDLSSDSDPETEPLVPGPGFVLVVCDSEVGEGVRE
VRRTPFSLSEYLQLSLEEAFFLVYSLGCLSVYQHQEPLSIIQLWRKFRSLYPDFVSSYAA
YHHFRSKGWVPKGGGGAKYGVNLMLYRKGPPFYHASYSVVIERVDDAFRGSALRPFSWRS
LAALSRITANVSKELMMCYIIYPVDLSEAELDSPECLIRLKVQEVIINRWVSSRERAEQE
DI
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgcaggcggagtttcgggctcctcggcggcgcacccgagtgcacgaggagtaccaggct
ccgctgccagttagcagcagcccggacgagaggaccgacctccgggcggagctcatcaac
caacacgtgctggtctgtcatccagaccacatccaaaagattcacaaccagggttatttt
ggtaaaggcatcctgtccagagccagaccggaccacagcatctccgaccaatgggagcaa
cacaaagggttgtttctacccgtcatctcacagtccaggtatgaggaactgcgatgttgg
gcgggggcagctctctccgctcagggattggatgatgaggctgtcagtcaaatcctgctc
acacactctcggcctgtagagatggaggatttgaggagggaggtgggagagggagagaac
ggacataggtgtgaggagggggaggagaaggggccaggaccagaggatggagtctgtccc
cacacaaagaggcctaagccgaggttagacgtcgagccggaggccaaaagaagctgcagg
ttggacccagaagacctgaaccatgatcacagctcagaccaggactctgactccaaccca
gatcctgaccctgtctctgacctcagctctgactctgatcctgagactgagcctttggtt
ccaggtcctggttttgtcctggtggtctgtgacagtgaggttggtgagggggtcagggag
gtcaggcggactccattctctctgtcagagtacctgcagctcagtctggaggaggctttc
ttcctggtctacagtttgggctgcctgtctgtctaccagcaccaggagcccctgtcaatc
atccagctgtggaggaagttccggtccctatatcctgactttgtcagctcgtatgcagct
tatcatcacttccgcagcaagggatgggtccctaaaggagggggcggggctaagtacggc
gtcaacctcatgttgtacaggaaaggcccacctttctaccatgccagttactctgtggta
attgagcgggttgacgatgcattcaggggctctgcgttgcgcccgttttcgtggcgttct
ctggcggctctcagtaggatcactgccaacgtctccaaggagctgatgatgtgttacatc
atctatccagttgacctatcagaagctgagctggactcacctgagtgtctaatcagactg
aaggttcaggaagtgatcatcaacagatgggtttcctccagagagcgagcagaacaggaa
gacatctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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