KEGG   Seriola dumerili (greater amberjack): 111219496
Entry
111219496         CDS       T05606                                 
Name
(RefSeq) syndecan-4-like isoform X1
  KO
K16338  syndecan 4
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu04512  ECM-receptor interaction
sdu04514  Cell adhesion molecules
sdu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    111219496
   04514 Cell adhesion molecules
    111219496
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111219496
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:sdu00535]
    111219496
Proteoglycans [BR:sdu00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   111219496
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 111219496
NCBI-ProteinID: XP_022597907
Position
Unknown
AA seq 212 aa
MLNLCLVLILSASVFSESQVRETETWMPMKTTQMVAMSSHRDDMESSGDSTNGSDFGFTD
DDEDDDYYEYDDEELSGSGDGATTELPETEFETSVKPDVSDNKIPEVELPVRPTVDEEGI
VRESNEIPRLGNEADPNEEYPSNVLMSHASEDSILNKTEVLAALIAGGAVCLMFAVLLIL
LLIYRMKKKDEGSYDLGKKPIYKKAPTTEIYA
NT seq 639 nt   +upstreamnt  +downstreamnt
atgctcaacctctgcctcgtgttgattctgtctgcctccgttttctcagagtcgcaggtc
agggagacggagacatggatgcccatgaaaaccacacagatggttgccatgtcatcgcac
cgggacgacatggagtcgtcgggagactctacgaacggctctgacttcggcttcacagac
gatgacgaagacgacgattactacgagtacgatgacgaggagttgtctgggtctggagat
ggagcaacaactgagttgcctgagacagagttcgagacatcagttaagcccgacgtcagc
gacaacaagatcccagaggtggagctgccggtgcgaccgaccgtcgacgaggagggcatc
gtacgcgagagtaacgaaatcccccggctgggcaacgaggcggaccccaacgaggaatac
ccatccaacgtcctcatgtcccacgccagtgaggacagcatcttgaacaagacggaggtc
ctcgcagctctgatcgcgggcggcgccgtctgcctgatgttcgccgtcctcctcatcctc
ctcctcatctaccgcatgaagaagaaggacgagggcagctacgacttggggaagaagccc
atctacaagaaggcccccaccacagagatctatgcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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