KEGG   Seriola dumerili (greater amberjack): 111222457
Entry
111222457         CDS       T05606                                 
Symbol
atg5
Name
(RefSeq) autophagy protein 5 isoform X1
  KO
K08339  autophagy-related protein 5
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu04136  Autophagy - other
sdu04140  Autophagy - animal
sdu04216  Ferroptosis
sdu04621  NOD-like receptor signaling pathway
sdu04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    111222457 (atg5)
   04136 Autophagy - other
    111222457 (atg5)
  09143 Cell growth and death
   04216 Ferroptosis
    111222457 (atg5)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    111222457 (atg5)
   04622 RIG-I-like receptor signaling pathway
    111222457 (atg5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdu04131]
    111222457 (atg5)
   03029 Mitochondrial biogenesis [BR:sdu03029]
    111222457 (atg5)
Membrane trafficking [BR:sdu04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    111222457 (atg5)
Mitochondrial biogenesis [BR:sdu03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    111222457 (atg5)
SSDB
Motif
Pfam: ATG5_UblA ATG5_UblB ATG5_HBR DUF6782 Peptidase_M99
Other DBs
NCBI-GeneID: 111222457
NCBI-ProteinID: XP_022601910
Position
Unknown
AA seq 275 aa
MADDKDVLRDVWFGRIPTCFTLNQDEVTEREAEPYYLLLPRVSYLTLVTDKVKKHFLKVM
KAEDVEEMWFEYEGTPLKWHYPIGVLFDLHASNTVLPWSITVHFKSFPDSDLLHCPSNSV
IEAHFMSSIKEADALKHKSQVVNDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTEEG
GFRYIPFRIYQTMSDRPFIQKQFRPVSPEGNVHTLGSLLKEMYPAAIPSDGEQKRYQVMI
HGIEPLLETPLQWLSEHLSHPDNFLHICIIPTPTD
NT seq 828 nt   +upstreamnt  +downstreamnt
atggcagatgacaaggacgtgttgagagacgtgtggttcggccggatccccacctgtttc
actttgaaccaggatgaggttactgagagagaggccgagccctactatctgctgttaccc
agggtgagctacctgactctggttacagacaaggtgaaaaaacacttcctcaaagtgatg
aaggccgaggacgtggaggagatgtggttcgagtatgaaggaactccacttaagtggcac
tatccaatcggagttctttttgacctccatgcctccaacactgtcttaccctggagcatc
actgtgcactttaagagttttccagatagtgacctgctccactgcccgtccaactctgtg
atcgaggctcacttcatgtccagcatcaaggaggccgacgccctcaagcacaagagccaa
gtcgttaacgacatgcagaagaaagaccacaagcagctgtggatgggcctgcagaacgat
aagtttgaccagttctgggccatgaacaggaagctgatggaatatcccacggaggaggga
ggcttcagatacatccccttcaggatataccagacgatgagtgacaggccgttcatccag
aaacagtttcgccctgtttcacctgaaggcaacgtacacacacttggcagcttgctgaaa
gaaatgtacccggctgccataccgagtgatggtgagcagaagcgttaccaggtgatgatc
cacggcatcgagccgctgctggagactcctctgcagtggctcagcgagcacctcagccac
cccgacaacttcctgcacatctgcatcatccccacccccaccgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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